Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., Chemotaxis regulator BdlA from Alteromonas macleodii MIT1002

 Score =  265 bits (678), Expect = 2e-75
 Identities = 152/407 (37%), Positives = 237/407 (58%), Gaps = 10/407 (2%)

Query: 32  LKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQFWKSL 91
           L+  + ++  + +G+I   N +F   +GY+  +V G     F  PE   S  +   +K L
Sbjct: 27  LREEMIFLNLNERGEIEAVNEVFEKELGYSLSQVKGHRFFEFV-PEIARSTPH---FKKL 82

Query: 92  AQGQAQRKMF----HRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITADKQ 147
                QR  +      L+++G   W+     P+ +  G+++K     +D+T+    + + 
Sbjct: 83  KDSIEQRVHYWGAIEFLRENGEEAWLRGVVEPIFDGKGNIHKFSVNLNDLTRTIANSKEH 142

Query: 148 AAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDDRFY--KENP 205
             +  +L +S+A+I+F+ +G I++ANE FLKA  YRL +I G+HHR+FCD  +   +E  
Sbjct: 143 EDLVAALHKSNAVIEFDLNGNIQDANEAFLKAVKYRLNDIKGQHHRIFCDTEYANSREYK 202

Query: 206 NFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVTDQVLKAH 265
            FW  L +GEF +G F R   HG  +WLEATYNPI +  G + +VVK A+D+T+QV + +
Sbjct: 203 TFWERLTQGEFVAGRFERFDAHGNTIWLEATYNPICDSHGRMYKVVKLATDITEQVAREN 262

Query: 266 ATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQRITQ 325
           A   A+ +A ++S  T ++A  G+E+I    +  S +++ +  A   +  L +QSQ+I  
Sbjct: 263 AVSSAADIAYRSSNTTDQIATRGKEVISELLSEMSSLSQQMDRAKEGINALDAQSQQIAT 322

Query: 326 IVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQATSEIDNIVKR 385
           I+ +I+ IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LAS T++AT EI N+VK 
Sbjct: 323 IIGSISAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLASRTTEATEEIINVVKH 382

Query: 386 NSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENVQKTV 432
           N  L   +   + +   K     +  ++   +IEQIQ  A+ V   V
Sbjct: 383 NQTLATDAVNLVNEGDEKAQSGLNYAREAGEVIEQIQDGAKEVVDAV 429



 Score =  114 bits (286), Expect = 5e-30
 Identities = 54/113 (47%), Positives = 74/113 (65%)

Query: 27  DIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQ 86
           D+V+AL ++ A IEFD  G I DAN  FL A+ Y   ++ GQHH+IFCD E  NS EY  
Sbjct: 144 DLVAALHKSNAVIEFDLNGNIQDANEAFLKAVKYRLNDIKGQHHRIFCDTEYANSREYKT 203

Query: 87  FWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTK 139
           FW+ L QG+     F R    G++IW+EATY P+ +  G +YKV+K+A D+T+
Sbjct: 204 FWERLTQGEFVAGRFERFDAHGNTIWLEATYNPICDSHGRMYKVVKLATDITE 256