Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  281 bits (720), Expect = 3e-80
 Identities = 178/501 (35%), Positives = 261/501 (52%), Gaps = 91/501 (18%)

Query: 27  DIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQ 86
           +++ A+ R+ A IEFD +G IL AN  F  A+GY   E++G+HH+IFCD E   S  Y +
Sbjct: 12  NMLDAISRSQAVIEFDLKGNILTANRNFCMALGYDLAEIVGKHHRIFCDREIAASHAYQE 71

Query: 87  FWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITADK 146
           FW+SLA+G+ Q K + R++KDGS++WIEA+Y PV  R+G  YKV+K+A D+T  +I A +
Sbjct: 72  FWESLARGEFQAKEYRRIRKDGSAVWIEASYNPV-FRSGKPYKVVKIATDITAKRIKAVE 130

Query: 147 QAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDDRFYKE--N 204
            A    +L RS A I+F PDGTI  AN NF     Y L+EI GKHHRMFCD  +      
Sbjct: 131 DAGKLEALSRSQATIEFFPDGTIITANPNFCATVNYDLKEIEGKHHRMFCDPAYTASAAY 190

Query: 205 PNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVTDQVLKA 264
            NFW+ LA GEF S  F R  ++G+++W++A YNP+ ++AG V +VVKFA+DVT ++   
Sbjct: 191 ANFWQRLASGEFISDEFVRYGKNGKEIWIQAAYNPVLDEAGKVVKVVKFATDVTPRMSAI 250

Query: 265 HATKEASQ------MAQQTSAETVRVAESGREMIDA---------------AATIASG-- 301
               +A Q      + Q+     V   E  R   +                A+TIASG  
Sbjct: 251 TVLADALQALAAGDLVQRLDTSFVPSMEKLRADFNEVVGKLQATMQTISHNASTIASGSG 310

Query: 302 -------------------ITESIAGANALMTDLSSQSQR-------------------- 322
                              + E+ A    + T ++  SQR                    
Sbjct: 311 EIRIAADQLSQRTEQQAASLEETAAALEEITTTVTDASQRAAEAGKLVLRTREHAEHSGD 370

Query: 323 ------------------ITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADE 364
                             IT I+  I+ IA QTNLLALNA +EAARAGE G+GFAVVA E
Sbjct: 371 VVQQAISAMDAISRSSGEITNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQE 430

Query: 365 VRSLASNTSQATSEIDNIVKRNSQ-------LTEQSGQTMEQIQAKVTEFNHMLQQTQSL 417
           VR LA  ++ A  EI +++  + +       L  ++G  +  IQ+++ E +  +      
Sbjct: 431 VRELAQRSAVAAKEIKSLINTSREQVANGVDLVGRTGGALRDIQSQMGEIDINVSAIVEA 490

Query: 418 IEQIQHAAENVQKTVSNIVDE 438
             +  +  + + + V N++D+
Sbjct: 491 SREQANGLKEINQAV-NVMDQ 510