Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  232 bits (592), Expect = 3e-65
 Identities = 141/422 (33%), Positives = 232/422 (54%), Gaps = 1/422 (0%)

Query: 140 GREHEEFERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLID-ILRKIEQATEQS 198
           G+   +++  L E    L++ R       D++      + +     D +L   ++ T   
Sbjct: 215 GQLPAQYQANLEEASTSLQAYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQ 274

Query: 199 VLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRA 258
            +V + +   A   ++  +  A++FGL+  +A ++QIV+ + +  ++A  +A G+ S   
Sbjct: 275 TVVRDADAAHAKQLLLLATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNL 334

Query: 259 KVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQAN 318
                DE+GQL  +M +M   L  ++G + D    IAS   QL++  E     V  Q+  
Sbjct: 335 TSMRQDELGQLQRAMQSMTVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVE 394

Query: 319 TEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQS 378
           T+QV +AM +MA T+ EVA +AEE+S A   A + AR    V+G+      +L      S
Sbjct: 395 TDQVATAMNEMAATVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNS 454

Query: 379 QQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 438
              + +L+  + +I S + V++ +++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA
Sbjct: 455 TVAMGDLKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLA 514

Query: 439 SRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELT 498
            R+Q++T EI+ LI  L    Q    ++D+S    + S      A   L SI   +  + 
Sbjct: 515 QRTQKSTEEIEELIVGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQ 574

Query: 499 SANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMG 558
           + N+Q+A A+E+QS  A+EI+ ++ ++RD  E    +++ETA +S ELA+    L+ L+G
Sbjct: 575 AMNSQIATAAEQQSAVAEEINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVG 634

Query: 559 RF 560
           RF
Sbjct: 635 RF 636