Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  237 bits (604), Expect = 1e-66
 Identities = 165/511 (32%), Positives = 264/511 (51%), Gaps = 26/511 (5%)

Query: 52  LAKLMTDMTVHQLEGAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQ 111
           LA+L +D+   + E A+      R A IE ++ + Q   + A  ++    + Q  N + +
Sbjct: 151 LAQLASDLPDQEDEKALDAVENLRQA-IEQAEDRAQSPAWAASSLDA---YAQAVNDAER 206

Query: 112 LLESSIEHTISPSIRSYLANLEQDLDSLGREHEEFERKLNELLNELRSGREVKLLVADAE 171
            LE +         ++ +A L  D  +L     E   +L  L       +E +L      
Sbjct: 207 NLELA---------QAAVAKLPVDSTALKNAVLEIRTRLTRL-------KEAQLTT---- 246

Query: 172 QIEQLQISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAF 231
             E+ Q  L+Q+L  +L + +  ++      + E  +A    + ++A A+L G++  +  
Sbjct: 247 --EKSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAEQARTQTLGVTAAALLLGVLAAWVI 304

Query: 232 SKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRA 291
           + QIV  + +A  +AN +AEG+ S   +    DE+GQL  SM  M  +L  ++G + D A
Sbjct: 305 AGQIVTPLRKALSVANRIAEGDLSHEVQTRRKDELGQLQHSMTQMTLNLRGLIGNISDNA 364

Query: 292 NTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQ 351
             IAS   +L++  E  +  V  Q+  TEQV +AM QM  T  EVA  AE++S A  +A 
Sbjct: 365 QQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQEVARHAEQASIAAGQAN 424

Query: 352 ENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLAL 411
                   V+         L     +S Q ++ L+  +++I S + V++ +S+QTNLLAL
Sbjct: 425 HQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSVLDVIKSVSQQTNLLAL 484

Query: 412 NAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDR 471
           NAAIEAARAGE G+GFAVVADEVR+LA R+QQ+  EI+ LI  L    Q    ++D S  
Sbjct: 485 NAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGLHSGTQQVADILDYSRT 544

Query: 472 QIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGET 531
             + S      A   L  I   +L +   N Q+AAA+EEQS  A+EI+ ++  +RDA E 
Sbjct: 545 LTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVAEEINRSVLKVRDASEQ 604

Query: 532 IMLSAQETAQASEELAQQAQGLKLLMGRFVI 562
              ++++TA AS ELA+    L+  +G+F +
Sbjct: 605 TAAASEQTAAASIELARLGTDLQQCVGQFKV 635