Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  201 bits (510), Expect = 8e-56
 Identities = 121/354 (34%), Positives = 197/354 (55%)

Query: 209 ALWGMIYLSAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQ 268
           A+ G+I +S  A L  ++L +  ++ IV  + +A ++A  +A GN SK  +    DE  +
Sbjct: 188 AITGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKAIEDDGKDEPAR 247

Query: 269 LITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQ 328
           L+ ++ TM  +L   +  +   A  +AS   +L++  E   K +QQQ    +Q  +A+ +
Sbjct: 248 LLGALATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQAATAVNE 307

Query: 329 MAITITEVASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEAS 388
           M   + EVA +A  +S A++++ + AR   D + +T      +  + Q +  MI  L   
Sbjct: 308 MTAAVEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGLATQ 367

Query: 389 TRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEI 448
            R I   + V+  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVRALA R+ Q+T EI
Sbjct: 368 GRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEI 427

Query: 449 KGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAAS 508
           + ++  +      A + +  S+++ + +     AA   L+ I  ++  +   N  +A+AS
Sbjct: 428 EKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERNLVIASAS 487

Query: 509 EEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRFVI 562
           EEQ+  + E+  N+ +IRD        A +T+ AS EL++ A  L  ++ RFVI
Sbjct: 488 EEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARFVI 541