Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  186 bits (473), Expect = 2e-51
 Identities = 149/557 (26%), Positives = 264/557 (47%), Gaps = 44/557 (7%)

Query: 18  GCLLALTLMVSTYSITKMKRVAVEIEAIAHDNLPLAKLMTDMTVHQLE-GAITLERVFRA 76
           G L  +   +  +++ +M  +  + + + ++ LP    + DM+   L   A+TL  +   
Sbjct: 17  GVLALMVFALGGFALLQMANMRQQSDQVENNWLPSVMAVGDMSQDLLRIRALTLRLLVNR 76

Query: 77  AGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSI----EHTISPSIRS----Y 128
                +Q +Q+  + +A L           +++R L +  I    E  +    ++    Y
Sbjct: 77  DPQALAQNEQKLTEIKANL-----------HRARTLYQGLIVLPAEQVLFDRFKAEEARY 125

Query: 129 LANLEQDLD-SLGREHEEFERKLNELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDI 187
           L   EQ +  S   + E+  R +N  +N+L                   +++   R +  
Sbjct: 126 LERQEQVVTLSKANQLEDAIRVVNGEMNQLAD-----------------EMAATLRELVT 168

Query: 188 LRKIEQATEQSVLVTEQEEREALW--GMIYLSAFAILFGLILGFAFSKQIVMAIARARKL 245
           L K   A + + L      +  +W  GMI L+A   L  + L    ++ IV+ +A++ K+
Sbjct: 169 LNKTS-ANQAASLAQSVFSQSRIWVIGMIVLTA---LVTIGLAVLLTRSIVLPLAQSLKV 224

Query: 246 ANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVTQLASSA 305
           A  +A G+ +    V   DE  +L  ++ +M ++L   +  + + +N +AS   +L+   
Sbjct: 225 AQGVASGDLTGEISVCGRDEPARLQQALKSMQENLRDTIRRISESSNQLASASEELSCVT 284

Query: 306 ESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCDVLGKTE 365
           E   + + QQ    EQ  +A+ QM   + EVAS+A  +S A+  +   A+   + + +T 
Sbjct: 285 EDATRGLHQQSQEIEQAATAVNQMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTV 344

Query: 366 TVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAARAGEQGR 425
                L  +   +   + +L      I   + V+  I+EQTNLLALNAAIEAARAG+ GR
Sbjct: 345 VSIEALATDVTDNVTQVEDLAQKVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGR 404

Query: 426 GFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSSITAAKK 485
           GFAVVADEVRALA R+QQ+T EI+ +I  + +    A   +  S+ +   +     +A  
Sbjct: 405 GFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGT 464

Query: 486 QLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQETAQASEE 545
            L+ I  A   +   N  +A+ASE+Q+  A E+  N+ +IRD        A +T+ AS +
Sbjct: 465 ALEEIASAFTLINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHD 524

Query: 546 LAQQAQGLKLLMGRFVI 562
           L++ A  L  L+ RF +
Sbjct: 525 LSRLAVDLNTLVARFSV 541