Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  196 bits (497), Expect = 3e-54
 Identities = 131/464 (28%), Positives = 232/464 (50%), Gaps = 14/464 (3%)

Query: 108 QSRQLLESSIEHTISPSIRSYLANLEQDLDSLGREHEEFERKLNELLNELRSGREVKLLV 167
           Q R  +   I   +  S  SY       L+   R   +   KL+++     S  E  + +
Sbjct: 78  QDRDRVRQDIAQELKRSQASYATYRATPLEDDERAAGD---KLDQIWPTYISSSERIMAL 134

Query: 168 ADAEQIEQLQISLDQRLIDILRKIEQAT-----------EQSVLVTEQEEREALWGMIYL 216
            D  Q++Q +  L+    ++ R+  +             ++  +  ++    AL  MI  
Sbjct: 135 LDGGQVDQARAQLNTSNNELFRQARELIRVMIESNNRQIKEGAVAADELRNSALTWMISG 194

Query: 217 SAFAILFGLILGFAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTM 276
              A L  +I+G   ++ I   IA+A + A  +A+G+ ++       DE GQL+ +++ M
Sbjct: 195 IVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAIITERTDEAGQLLMALSDM 254

Query: 277 AQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEV 336
              L   + E+ + ++ +AS   +L++  + + + + +Q    +Q  +A+ QM   + EV
Sbjct: 255 QGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEV 314

Query: 337 ASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFV 396
           AS+A  +S A+ +A   A      + +  +  S +V     S Q + +L    R+I   +
Sbjct: 315 ASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVI 374

Query: 397 LVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLV 456
            V+ GI++QTNLLALNAAIEAARAGEQGRGFAVVADEVRALA R+Q +T +I+ +I  + 
Sbjct: 375 DVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQISTVDIEKMIGDVQ 434

Query: 457 ERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAAD 516
             A  A   ++ S      + +    A + L  I  ++ ++   N  +A+ASEEQ+  A 
Sbjct: 435 TGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNLVIASASEEQAQVAR 494

Query: 517 EISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           E+  N+ +I+D        A +T  +S++L++ A    +L+ +F
Sbjct: 495 EVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSKF 538