Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  182 bits (461), Expect = 4e-50
 Identities = 135/443 (30%), Positives = 230/443 (51%), Gaps = 59/443 (13%)

Query: 151 NELLNELRSGREVKLLVADAEQIEQLQISLDQRLIDIL--RKIEQATE----------QS 198
           +++L +L +  E K L+A A++   L + L+ +L ++    K ++AT+          ++
Sbjct: 100 HKVLEKLVTTPEGKALLARADEKAALLLPLNAQLSELALQNKNDEATQIFIAKFQPAVRN 159

Query: 199 VL------------VTEQEEREALWG-------MIYLSAFAILFGLILGFAFSKQIVMAI 239
           VL            +++   REA  G       M  L  FAILFG  + +  +  I   I
Sbjct: 160 VLTELDAMDANENKLSQAASREAAEGYAWSRNLMFALGGFAILFGAAIAWFTTHSITRPI 219

Query: 240 ARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIASTVT 299
             A ++A ++A G+ + R +V + DE G+L+T++  M +SL  IV EV    +TIA+  +
Sbjct: 220 GEAVEVAEKVAAGDITSRIEVRSKDETGRLMTALKAMNESLVRIVREVRMGTDTIATASS 279

Query: 300 QLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENARYSCD 359
           Q+AS  +      ++Q ++ EQ  ++M Q+  T+ + A +A +++     A E A    D
Sbjct: 280 QIASGNQDLSSRTEEQASSLEQTAASMEQLTSTVKQNADNARQANQLAVSASEVAVKGGD 339

Query: 360 VLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAIEAAR 419
           V+       SQ+V         +  ++AS+++I   + V++GI+ QTN+LALNAA+EAAR
Sbjct: 340 VV-------SQVVGT-------MGSIDASSKKIVDIIGVIDGIAFQTNILALNAAVEAAR 385

Query: 420 AGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEESFSS 479
           AGEQGRGFAVVA EVR+LA RS  A  EIK LI   VE+ +  +K +  + R +E+   S
Sbjct: 386 AGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVEEGSKQVAEAGRTMEQIVGS 445

Query: 480 ITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLSAQET 539
           +                +T    ++ AAS+EQ+   ++I+  +T +    +      +E 
Sbjct: 446 VK--------------RVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEA 491

Query: 540 AQASEELAQQAQGLKLLMGRFVI 562
           + A++ L +QA  L   +  F I
Sbjct: 492 SAAAQSLQEQASSLVQTVSIFKI 514