Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  200 bits (509), Expect = 1e-55
 Identities = 112/344 (32%), Positives = 201/344 (58%), Gaps = 4/344 (1%)

Query: 221 ILFGLILGFAFS--KQIVMAIARARKLANEMAEGN--FSKRAKVTTGDEIGQLITSMNTM 276
           +L G+ +G       QI   + R +    ++A+G+   ++R +V   D++ Q+    N  
Sbjct: 297 VLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRF 356

Query: 277 AQSLSHIVGEVIDRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEV 336
           + +L +++ ++ D    I+S++ QL+ +A+ N++ +    + T+QV +A+ QM+ +   V
Sbjct: 357 SGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTV 416

Query: 337 ASSAEESSAATARAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFV 396
           A S  +S+  T  A + A+ S  ++    +  + LV + +   + I  +     +I   +
Sbjct: 417 AESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVL 476

Query: 397 LVVEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLV 456
            V+  ISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA+R+Q +T EI  ++  L+
Sbjct: 477 SVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLL 536

Query: 457 ERAQSATKMIDSSDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAAD 516
           E   S    ++ + +Q + +    +     L+ ++ ++ ++   +TQ+AAA+E+QS  A 
Sbjct: 537 EGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAA 596

Query: 517 EISHNMTDIRDAGETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
           E+S NM  IR+  E++++S ++T  A+E L+     L+ L+G+F
Sbjct: 597 ELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKF 640