Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  218 bits (555), Expect = 6e-61
 Identities = 157/509 (30%), Positives = 260/509 (51%), Gaps = 28/509 (5%)

Query: 65  EGAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHTISPS 124
           +G  TL++     G E  +   Q  Q    +++ +++ +    +SR+  E   +  I+ +
Sbjct: 151 DGVYTLKQSQGQQGGEFLEQAAQVAQVSRLMLQAMDEARVRLEKSRKGEEGVSQERIAQT 210

Query: 125 IRS--YLANLEQDLDSLGREHE---------EFERKLNELLNELRSGREVKLLVADAEQI 173
           + +   ++ L+  +   G +            F  KLNE  ++L   + +K         
Sbjct: 211 VEAAGLVSQLQGAVGDAGYQSVLGEVAGHIGSFSEKLNEYTDQLAREQGLKA-------- 262

Query: 174 EQLQISLDQRLIDILRKIEQAT--EQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAF 231
            QLQ S ++    +  +++QA   ++  L  E +      G+   +A A+L G++  +  
Sbjct: 263 -QLQASAER----VTGRVDQAYLGQEQALQGELQRNAIAIGLA--TALALLVGVLAAWLI 315

Query: 232 SKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRA 291
           ++ +V  +      A  +A G     A+    DE+GQL+ +M  MA  LS IV  +    
Sbjct: 316 TRAVVGPLKHVIARAQRIAAGELGFDAQAPRRDEVGQLMQAMQQMAAGLSGIVSGLQQGI 375

Query: 292 NTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQ 351
             +A +   L++  E   + V  Q+  TEQV +AM QM  T+ +VA +AEE++ A   A 
Sbjct: 376 EQLAGSAQALSTVTEQTNREVGSQKEETEQVATAMQQMTATVHDVARNAEEAAQAAQAAD 435

Query: 352 ENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLAL 411
           E       V+ ++     QL + A+ +   I  L A    I   + V++ ++EQTNLLAL
Sbjct: 436 EKVDTGQQVVRQSMQRIEQLASAAEAASAGIDSLSAEIHTIGDVLEVIKSVAEQTNLLAL 495

Query: 412 NAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDR 471
           NAAIEAARAGEQGRGFAVVADEVRALA R++Q+T +I+ L+ +L   AQ +   I  S  
Sbjct: 496 NAAIEAARAGEQGRGFAVVADEVRALARRTRQSTEQIETLVASLRGNAQQSVAQIRGSTE 555

Query: 472 QIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGET 531
            +  + +     +  L SI  A+  +   N Q+AAA+E+QS  A+EIS ++T IR + + 
Sbjct: 556 LVRLAVADALQTESALGSIAAAVSLIQQMNQQIAAAAEQQSSVAEEISRSVTQIRGSADQ 615

Query: 532 IMLSAQETAQASEELAQQAQGLKLLMGRF 560
             L+ Q+ A++S ELAQ    LK ++G F
Sbjct: 616 AALAMQDNARSSVELAQLGTDLKGMVGHF 644