Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  207 bits (528), Expect = 6e-58
 Identities = 160/572 (27%), Positives = 288/572 (50%), Gaps = 54/572 (9%)

Query: 6   NLSITQKMI---ALVGCLLALTLMVSTYSITKMKRVAVEIEAIAHDNLPLAKLMTDMTVH 62
           N++I  + +   AL+G L+   L +  +S+ +M  +     AI   ++P  K++ ++T  
Sbjct: 5   NMNIAPRALLGFALIGLLM---LGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTAL 61

Query: 63  QLEGAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQL-LESSIEHTI 121
            L       R+             ++   Q   ++++++   + +++RQ  L   +    
Sbjct: 62  NLRMRTLSYRLLL----------NREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADE 111

Query: 122 SPSIRSY--LANLEQDLDSLGREHEEFER--KLNELLNELRSGREVKLLVADAEQIEQLQ 177
             +   Y  L N  + L+S  R   + +R  +L +LLN        + L+A++EQI    
Sbjct: 112 QAAFDQYGQLLNQYRQLESRMRTLSQADRLDELRDLLN--------RDLLANSEQIN--- 160

Query: 178 ISLDQRLIDILRKIEQATEQSVLVTEQEEREALWGMIYLSAFAILFGLILG--------- 228
                +++D L +I   T+Q+    E+   +      Y  AFA++ GL++          
Sbjct: 161 -----KVMDTLVRIN--TDQTRATNEKAANQ------YAGAFALVIGLLVAATVLTFACA 207

Query: 229 FAFSKQIVMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVI 288
           F  ++ IV  I  A K A ++A+G+ +   +    DE  +L+ +M  M   L   + ++ 
Sbjct: 208 FLLTRSIVKPIEEALKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQIA 267

Query: 289 DRANTIASTVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATA 348
             A  +AS   +L +  + + + +QQQ    EQ  +A+ +M   + EVA +A  +S A++
Sbjct: 268 GSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASS 327

Query: 349 RAQENARYSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNL 408
            A  +     D++ +T     ++  + Q + ++I  L   +R I   + V+ G+++QTNL
Sbjct: 328 EASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNL 387

Query: 409 LALNAAIEAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDS 468
           LALNAAIEAARAGE GRGFAVVADEVRALA R+QQ+T EI+ +I ++    + A + + +
Sbjct: 388 LALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMRT 447

Query: 469 SDRQIEESFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDA 528
           S  + E + +    A   LD+I  A+ ++   N  +A+A+EEQ+  A E+  N+ +I D 
Sbjct: 448 STERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNINDL 507

Query: 529 GETIMLSAQETAQASEELAQQAQGLKLLMGRF 560
                  A +T+ AS EL++ A  L  L+ RF
Sbjct: 508 SVQSATGAHQTSAASAELSRLAVDLNGLVARF 539