Pairwise Alignments

Query, 563 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  231 bits (589), Expect = 5e-65
 Identities = 163/505 (32%), Positives = 267/505 (52%), Gaps = 19/505 (3%)

Query: 65  EGAITLERVFRAAGIESSQGKQQQNQYQAQLMELVNKFKQEFNQSRQLLESSIEHTISPS 124
           +GA TL+      G +  +   Q +Q    +++ +N+ +   +QSR+      ++    +
Sbjct: 15  DGAYTLKDTEGKDGAQFIEQANQVSQVSRLMLQAMNEARVRLDQSRK---GDADNAGQGN 71

Query: 125 IRSYLANLEQDLDSLGR--EHEEFERKLNELLNELRSGRE-----VKLLVADAEQIEQLQ 177
           I    A  ++  ++L    + E +   LNE+   +    E       LL  +    +QL 
Sbjct: 72  IEQ-AAQAQEQAEALKTTVKDEGYLTVLNEVSGHIAGFNEKLAEYTGLLAQEKTVYDQLH 130

Query: 178 ISLDQRLIDILRKIEQA--TEQSVLVTEQEEREALWGMIYLSAFAILFGLILGFAFSKQI 235
               QR   ++ ++ QA   E + +  E ++   L  +I  SA A+L GL+  +  ++ I
Sbjct: 131 ----QRAAQVVDRVNQAYVAEDASMQAELKKNTVL--IIGSSALALLVGLLAAWVITRLI 184

Query: 236 VMAIARARKLANEMAEGNFSKRAKVTTGDEIGQLITSMNTMAQSLSHIVGEVIDRANTIA 295
           V  +    ++A ++A G+ + + +VT  DE+GQL+ +M  MA  L  IV  +      +A
Sbjct: 185 VAPLRSVIRVAQQIAAGDLTAKVEVTRRDEMGQLMLAMQQMAAGLGTIVSGLQAGIERLA 244

Query: 296 STVTQLASSAESNKKSVQQQQANTEQVTSAMAQMAITITEVASSAEESSAATARAQENAR 355
            +   L++  E     V  Q+  TEQV +AM QM  T+ +VA +AEE++ A   A +   
Sbjct: 245 GSAQSLSAVTEQTNLEVNSQKEETEQVATAMNQMTATVHDVARNAEEAALAAQTADDKVE 304

Query: 356 YSCDVLGKTETVSSQLVANAQQSQQMIVELEASTRQIESFVLVVEGISEQTNLLALNAAI 415
               V+ ++     QL  +A  +   I  L A  + I + + V++ ++EQTNLLALNAAI
Sbjct: 305 SGQQVVRQSMARIEQLADSATSASSSIESLSAEIQNIGTVLEVIKSVAEQTNLLALNAAI 364

Query: 416 EAARAGEQGRGFAVVADEVRALASRSQQATHEIKGLIQTLVERAQSATKMIDSSDRQIEE 475
           EAARAGEQGRGFAVVADEVRALA R+QQ+T EI+ L+  L   AQS+ + I SS   ++ 
Sbjct: 365 EAARAGEQGRGFAVVADEVRALARRTQQSTEEIERLVSALRAAAQSSVQQIRSSGELVKL 424

Query: 476 SFSSITAAKKQLDSINLALLELTSANTQVAAASEEQSVAADEISHNMTDIRDAGETIMLS 535
           + S     +  L SI  A+  +   N Q+AAA+EEQS  A+EI+ ++T IR + +   ++
Sbjct: 425 AVSDALQTESALGSIAAAVSLIQQMNQQIAAAAEEQSSVAEEINRSVTQIRASADHSSVA 484

Query: 536 AQETAQASEELAQQAQGLKLLMGRF 560
            +  A +S ELAQ    L+ ++G F
Sbjct: 485 MRGNAASSVELAQLGGELRSMVGHF 509