Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Score = 122 bits (305), Expect = 6e-32
Identities = 81/261 (31%), Positives = 135/261 (51%), Gaps = 14/261 (5%)
Query: 71 QLRSSMEQIAVGAEESSSATKQSETAVSQMNNFINEQATYATQ-------SKQILTKLEQ 123
++ EQ +GA ES+SA Q + Q+ ++E A AT+ + + ++
Sbjct: 354 EIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADE 413
Query: 124 DIVDVANKINEMVSNVQTSSERQNDSVKRMIELSEQAAKINDAVKQVIHIADQTNLLALN 183
D + +++ ++ S R +V+ + L I +K + IADQTNLLALN
Sbjct: 414 ASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALN 473
Query: 184 AAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQK 243
AAIEA RAG+ G+GFAVVAD VRTLA++ +++ I ++I+ + +GA VS + S
Sbjct: 474 AAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYT 533
Query: 244 AESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAADEMSSAA------VIALKG-SESV 296
A+ VQK + N+ L IR + + + + AA+E S A + +K S V
Sbjct: 534 ADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQV 593
Query: 297 SQAAQEQSAACEESLKSLDQQ 317
+ +A+ S A E +++ +Q
Sbjct: 594 ADSAKSASMAMEVQTENVREQ 614
Score = 92.4 bits (228), Expect = 5e-23
Identities = 125/609 (20%), Positives = 253/609 (41%), Gaps = 82/609 (13%)
Query: 51 VASATAELLAGLEESSSAMTQ-------LRSSMEQIAVGAEESSSATKQSETAVSQMNNF 103
+A +T E+L L+ ++ A + L+ S I +G E ++ + + +
Sbjct: 63 LAQSTTEILQ-LDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYD 121
Query: 104 INEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRM---IELSEQA 160
++ Y ++ + + VD++ K +++ ++ T +Q++ V M +EL++ A
Sbjct: 122 PRKRPWYVDAKRERKLVVTEPYVDISTK--KIIISIGTPVYQQSNFVGAMFYDVELTQLA 179
Query: 161 AKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAEKNAANIE 220
+N +++ D L F D V AE N
Sbjct: 180 QLVNS-----VNLFDAGYL------------------FITTKDGVTIAHPNAENNGEKFS 216
Query: 221 SLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSEVLLKAAD 280
+ ++ +K +Q+ E + K ++V + + V D + D
Sbjct: 217 QFLPNVD---------LKEGTQRIELD-GKYYLVKFAQVPSESWYIGAVVDESIAFAMVD 266
Query: 281 EMSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQIALDGAVTAAQSLDELTDELRT 340
++ +++I +S S + +K L A++ A +LT L T
Sbjct: 267 DLRHSSLIYTVIGVLLSIIGL--SFLIKVLMKPLGALSRAIEDV---ASGQGDLTKRLDT 321
Query: 341 STDIVKS--SEEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLT 398
+TD+ + +++ E L I+ + EIM Q GA A ++ + L
Sbjct: 322 NTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELE 381
Query: 399 QIEQG-------ARLGKERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLN 451
Q+ A A+ + A + ++ V + +I + + +
Sbjct: 382 QLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVE 441
Query: 452 EMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLAND 511
E+ +E + I+ I+ I++++ QT +LA+N A+EAARAGE G+GFAVV+ +++ LA
Sbjct: 442 EVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQR 501
Query: 512 AAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLG 571
++ +I++ ++ +Q + V + + T + QKA L + L +R
Sbjct: 502 TQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIR--------- 552
Query: 572 SKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENI 631
G I+R I+D QIA+AAEE S E T + ++++A + ++
Sbjct: 553 --------GAIQR-ISDMN---MQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKS- 599
Query: 632 AAVADELQS 640
A++A E+Q+
Sbjct: 600 ASMAMEVQT 608
Score = 27.3 bits (59), Expect = 0.002
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 21 STSANAPKKEADDLRRQAR----TLARKQQAAERVASATAELLAGLEESSSAMTQLRSSM 76
S + N K ADD ++A+ +L R + A +R++ ++ + EE S ++ ++
Sbjct: 524 SAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNT 583
Query: 77 -------EQIAVGAEESSSATKQSETAVSQMNNFIN 105
Q+A A+ +S A + V + +N
Sbjct: 584 VKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLN 619