Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  121 bits (303), Expect = 8e-32
 Identities = 99/347 (28%), Positives = 163/347 (46%), Gaps = 45/347 (12%)

Query: 23  SANAPKKEADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVG 82
           SA  P    D++ + A      Q    RV S  A   A L+   S   +L +SM  +  G
Sbjct: 185 SARVPLASGDEVGQMAGAFNAMQSTYHRVVSTVAHSAAQLD---SGAARLAASMSDVRHG 241

Query: 83  AEESSSATKQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTS 142
                S T Q+ TA+++M+  ++  A +A  ++     L Q    +A     +VS VQ S
Sbjct: 242 MLGQQSETDQAATAINEMSATVHHIAQHAGATRD----LSQTADTLAGSGQAVVSRVQDS 297

Query: 143 SERQNDSVKRMIE----LSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGF 198
               +  V++  E    L+E + KIN  V  +  IA+QTNLLALNAAIEA RAG  G+GF
Sbjct: 298 ISGLSSGVQQTAEMIRQLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGF 357

Query: 199 AVVADTVRTLAEKAEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQL 258
           AVVAD VR LA++ + +   I +++  + +G       ++ SS KA+             
Sbjct: 358 AVVADEVRNLAKRVQTSTDEITTMVSALQSGTRDAVEFMQESSYKAD------------- 404

Query: 259 TLIRNEMVDLVKDSEVLLKAADEMSSAAVIALKGSESVSQAAQEQSAACEESLKSLDQQQ 318
                   D V+ ++   +A  E++ A     + +  ++ AA++QS   EE         
Sbjct: 405 --------DCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVAEE--------- 447

Query: 319 IALDGAVTAAQSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEI 365
             ++ AV + + + E T  ++ +     +S E+A  A EL+  I ++
Sbjct: 448 --MNRAVVSIRDVTERT--VQQTVGSATTSSELATLAGELNKAIGQL 490



 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 75/326 (23%), Positives = 135/326 (41%), Gaps = 54/326 (16%)

Query: 323 GAVTAAQSLDELTDELRTSTDIVKSSEEVAAAAEELSAGIEEINRS-------SNEIMGA 375
           GA  A QS        R  + +  S+ ++ + A  L+A + ++          +++   A
Sbjct: 201 GAFNAMQSTYH-----RVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATA 255

Query: 376 LNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESSLKACEKMLTGIEENKTTVDEM 435
           +N++S+   H+A+    G T    + Q A       ++ +   +  ++G+        EM
Sbjct: 256 INEMSATVHHIAQ--HAGATR--DLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEM 311

Query: 436 ILAITESTKAATENLNEMANIERISRQIDKIVDGISNVSIQTAMLAVNGAVEAARAGEYG 495
           I  + E                  S++I+ +V  I +++ QT +LA+N A+EAARAG+ G
Sbjct: 312 IRQLAED-----------------SQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLG 354

Query: 496 KGFAVVSTDIQNLANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTI 555
           +GFAVV+ +++NLA     + ++I   V  +Q           D +  + E + KA    
Sbjct: 355 RGFAVVADEVRNLAKRVQTSTDEITTMVSALQ-------SGTRDAVEFMQESSYKA---- 403

Query: 556 KQLDNVRSRMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAAR 615
                      D V  ++   E+   I  ++A  R    QIA AAE+ S    E   A  
Sbjct: 404 ----------DDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVAEEMNRAVV 453

Query: 616 QQSSSTSELASAIENIAAVADELQSI 641
                T          A  + EL ++
Sbjct: 454 SIRDVTERTVQQTVGSATTSSELATL 479