Pairwise Alignments
Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440
Score = 129 bits (324), Expect = 3e-34
Identities = 81/292 (27%), Positives = 153/292 (52%), Gaps = 4/292 (1%)
Query: 32 DDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATK 91
D+ R R +AR Q +++ ++ + +SA +L + ++ A G ++ ++ +
Sbjct: 243 DEAARLLRAMARMQ---DKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIE 299
Query: 92 QSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVK 151
Q+ TAV++M + + E A A + + ++ + D + + E V ++ S + K
Sbjct: 300 QAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAK 359
Query: 152 RMIELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEK 211
+ L+EQ+ I + + +ADQTNLLALNAAIEA RAG+ G+GFAVVAD VR LA +
Sbjct: 360 LITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHR 419
Query: 212 AEKNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKD 271
+++ + IE +I I G E +++S+++AES + L I + + +
Sbjct: 420 TQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINER 479
Query: 272 SEVLLKAADEMSSAAVIALKGSESVSQ-AAQEQSAACEESLKSLDQQQIALD 322
+ V+ AA+E + A + +++ + Q + A + S S + ++A+D
Sbjct: 480 NLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVD 531
Score = 94.7 bits (234), Expect = 9e-24
Identities = 79/326 (24%), Positives = 154/326 (47%), Gaps = 28/326 (8%)
Query: 302 EQSAACEESLKSLDQQQI----ALDGAVTAAQSLDELTDELR-TSTDIVKSSEEVAAAAE 356
E++ C E + D + D A +++ + D+LR T I S+ ++A+AAE
Sbjct: 219 EEALKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAE 278
Query: 357 ELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGKERAESSLK 416
EL+A +E R G Q +E T++T++ A S+ +
Sbjct: 279 ELNAVTDESAR--------------GLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSE 324
Query: 417 ACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVDGISNVSIQ 476
A + + + V E + AI + + ++ SR I K++D I ++ Q
Sbjct: 325 ASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQ 384
Query: 477 TAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQ----EQINI 532
T +LA+N A+EAARAGE G+GFAVV+ +++ LA+ ++ +I+ + +IQ E +
Sbjct: 385 TNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVES 444
Query: 533 VRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSD----VVLGSKRISESAGGIERSIAD 588
+R ST + A+ A + + + +++++ + ++ ++ A ++R++ +
Sbjct: 445 MRTSTERAEST-LNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVN 503
Query: 589 ARAGMQQIATAAEESSHATGEAATAA 614
Q AT A ++S A+ E + A
Sbjct: 504 INDLSVQSATGAHQTSAASAELSRLA 529
Score = 35.8 bits (81), Expect = 5e-06
Identities = 42/200 (21%), Positives = 90/200 (45%), Gaps = 43/200 (21%)
Query: 449 NLNEMANIERISRQIDKIVDGISNVSIQTAMLAVN----------GAVEAARAGEYGKGF 498
N + +AN E+I++ +D +V ++ + T A N G + AA + F
Sbjct: 149 NRDLLANSEQINKVMDTLVRINTDQTRATNEKAANQYAGAFALVIGLLVAATVLTFACAF 208
Query: 499 AVVSTDIQNLANDAAENAEQIKDQVKNIQEQINIVRKDLADILSTVMEEAQKAALTIKQL 558
+ + ++ + +A + AEQ+ D DL ++ E +AA ++ +
Sbjct: 209 LLTRSIVKPI-EEALKCAEQVADG-------------DLTHVIRA--EGTDEAARLLRAM 252
Query: 559 DNVRSRMSDVVLGSKRISESAGGIERSIADARAGMQQIATAAEESSHATGEAATAARQQS 618
++ ++ D + ++I+ SA Q+A+AAEE + T E+A +QQ+
Sbjct: 253 ARMQDKLRDTL---QQIAGSA--------------TQLASAAEELNAVTDESARGLQQQN 295
Query: 619 SSTSELASAIENIAAVADEL 638
+ + A+A+ + + +E+
Sbjct: 296 NEIEQAATAVTEMTSAVEEV 315
Score = 30.4 bits (67), Expect = 2e-04
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 ADDLRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSAT 90
AD++R A R QQ+ + + G EE+ +M E A + A
Sbjct: 410 ADEVRALAH---RTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMAL 466
Query: 91 KQSETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSV 150
AV+Q+N A+ A + Q+ ++++++V+ IN++ +VQ+++ S
Sbjct: 467 DTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVN----INDL--SVQSATGAHQTSA 520
Query: 151 KRMIELSEQAAKINDAV 167
ELS A +N V
Sbjct: 521 -ASAELSRLAVDLNGLV 536