Pairwise Alignments

Query, 641 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  100 bits (250), Expect = 1e-25
 Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 7/275 (2%)

Query: 34  LRRQARTLARKQQAAERVASATAELLAGLEESSSAMTQLRSSMEQIAVGAEESSSATKQS 93
           +R  A  + + +   E  ++ T E++ G ++   A     ++M +I+   ++  +    S
Sbjct: 201 VRPFAELIDQVKALIELASNLTDEVVRGCDKMELAA----NNMFEISRNTDQEIAMVSAS 256

Query: 94  ETAVSQMNNFINEQATYATQSKQILTKLEQDIVDVANKINEMVSNVQTSSERQNDSVKRM 153
              ++Q      EQ T A+          Q   D  +  +  + +++ +    N + +  
Sbjct: 257 SEEIAQTMQLSTEQTTLASDKASAAQSSSQTTRDSISNTSRTIDSLRNTL---NAAAQTN 313

Query: 154 IELSEQAAKINDAVKQVIHIADQTNLLALNAAIEAGRAGKHGKGFAVVADTVRTLAEKAE 213
             L+EQ A I+DA++ +  +A+QTNLLALNAAIE+ RAG+HG+GFAVVAD VRTLA +++
Sbjct: 314 SALNEQCAHISDAMRSITAVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRTLAIRSK 373

Query: 214 KNAANIESLIKDISNGAEMVSNGVKSSSQKAESEVQKGHVVNKQLTLIRNEMVDLVKDSE 273
           ++A  I S+ + +          +++  Q  +  V         +T I  ++ +  +   
Sbjct: 374 ESADQITSITEQLVAQTASSVEQMQTCIQLVDEAVVSSDNATSAMTQIMQQIREASESMT 433

Query: 274 VLLKAADEMSSAAVIALKGSESVSQAAQEQSAACE 308
            +  +A E  +A+    + +  +S+   E+ A  E
Sbjct: 434 EIATSAVEQETASSSIAQSTARLSEFTSEELATAE 468



 Score = 91.3 bits (225), Expect = 9e-23
 Identities = 77/353 (21%), Positives = 156/353 (44%), Gaps = 44/353 (12%)

Query: 298 QAAQEQSAACEESLKSLDQQQ--------IALDGAVTAAQSLDELTDELRTSTDIVKS-S 348
           Q+ QE + A E  L     Q+        I L+      +   EL D+++   ++  + +
Sbjct: 163 QSHQEGAGAAELRLAIETMQKGDGRLDLSIELNRGHKIVRPFAELIDQVKALIELASNLT 222

Query: 349 EEVAAAAEELSAGIEEINRSSNEIMGALNQISSGAQHMAKSVETGITSLTQIEQGARLGK 408
           +EV    +++      +   S      +  +S+ ++ +A++++      T       L  
Sbjct: 223 DEVVRGCDKMELAANNMFEISRNTDQEIAMVSASSEEIAQTMQLSTEQTT-------LAS 275

Query: 409 ERAESSLKACEKMLTGIEENKTTVDEMILAITESTKAATENLNEMANIERISRQIDKIVD 468
           ++A ++  + +     I     T+D +   +  + +  +    + A+I    R I  + +
Sbjct: 276 DKASAAQSSSQTTRDSISNTSRTIDSLRNTLNAAAQTNSALNEQCAHISDAMRSITAVAE 335

Query: 469 GISNVSIQTAMLAVNGAVEAARAGEYGKGFAVVSTDIQNLANDAAENAEQIKDQVKNIQE 528
                  QT +LA+N A+E+ARAGE+G+GFAVV+ +++ LA  + E+A    DQ+ +I E
Sbjct: 336 -------QTNLLALNAAIESARAGEHGRGFAVVADEVRTLAIRSKESA----DQITSITE 384

Query: 529 QINIVRKDLADILSTVMEEAQKAALTIKQLDNVRSRMSDVVLGSKRISESAGGIERSIAD 588
           Q+                   + A +++Q+      + + V+ S   + +   I + I +
Sbjct: 385 QL-----------------VAQTASSVEQMQTCIQLVDEAVVSSDNATSAMTQIMQQIRE 427

Query: 589 ARAGMQQIATAAEESSHATGEAATAARQQSSSTSELASAIENIAAVADELQSI 641
           A   M +IAT+A E   A+   A +  + S  TSE  +  E++A   + L  I
Sbjct: 428 ASESMTEIATSAVEQETASSSIAQSTARLSEFTSEELATAESLAGEVEVLSQI 480