Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., Chemotaxis protein CheW from Pseudomonas putida KT2440

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 51/144 (35%), Positives = 93/144 (64%), Gaps = 2/144 (1%)

Query: 369 MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRF 428
           +Q V F+LD E +GI++  VQE++R  E I+ VP    ++ G+INLRGNV+ ++D R+RF
Sbjct: 14  LQWVTFRLDNESYGINVMQVQEVLRYTE-IAPVPGAPSYVLGIINLRGNVVTVIDTRQRF 72

Query: 429 HLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLMRQMV 487
            L      +  RI+++  +K   G +VDSV+EV+ + +S++E AP V +EE A+ ++ + 
Sbjct: 73  GLMPTEVTDNTRIVIIEADKQVVGILVDSVAEVVYLRQSEIETAPNVGNEESAKFIQGVC 132

Query: 488 NLSPRMIGVLSADQLISNTEMYKL 511
           N +  ++ ++  D++++  E  +L
Sbjct: 133 NKNGELLILVELDKMMTEEEWSEL 156



 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 38/148 (25%), Positives = 74/148 (50%)

Query: 14  EENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLR 73
           E+ + Q+V F L +E + +++ +V+E++R      VP  PSY++G+ NLRG ++ V+  R
Sbjct: 10  EDPILQWVTFRLDNESYGINVMQVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTR 69

Query: 74  TLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133
               +  T  T+ TR+++I   K  +G  VD V  V       I+     G +     I 
Sbjct: 70  QRFGLMPTEVTDNTRIVIIEADKQVVGILVDSVAEVVYLRQSEIETAPNVGNEESAKFIQ 129

Query: 134 NTIHSDNQIIQVLNCHRLLDNSVEEELE 161
              + + +++ ++   +++      ELE
Sbjct: 130 GVCNKNGELLILVELDKMMTEEEWSELE 157



 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 7/131 (5%)

Query: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246
           ++ + Q V   +D + Y   +   QE++R  EI   VP   S +LG+INLRG  + ++  
Sbjct: 10  EDPILQWVTFRLDNESYGINVMQVQEVLRYTEI-APVPGAPSYVLGIINLRGNVVTVIDT 68

Query: 247 RTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM 306
           R  FGL     +D+ R++++     E ++  VG++VD+V EV+ L    +++ P + ++ 
Sbjct: 69  RQRFGLMPTEVTDNTRIVII-----EADKQVVGILVDSVAEVVYLRQSEIETAPNVGNE- 122

Query: 307 GQANDISAICN 317
             A  I  +CN
Sbjct: 123 ESAKFIQGVCN 133