Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., Chemotaxis protein CheW from Pseudomonas lactucae CFBP13502

 Score = 73.2 bits (178), Expect = 7e-18
 Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 7/154 (4%)

Query: 368 DMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKR 427
           D Q + F L  E F I I  ++EII    +++ VP    F+ GVINLRG V+P+VD+  R
Sbjct: 17  DAQYLTFMLGGEMFAIGILGIKEIIEYG-SLTVVPMMPAFVRGVINLRGAVVPVVDLSAR 75

Query: 428 FHLPEMARHERQRILVV-----NFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEE-QAQ 481
           F     A   R  ++++     + +    G +VD+VS V  IP +Q+E  P      +A 
Sbjct: 76  FGRANSAITRRSCVIIIEASTEDGQPQDIGLLVDTVSAVQEIPAAQIEPPPSFGARIRAD 135

Query: 482 LMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAA 515
            +  M  +  + + VL  D+++S  EM  L  +A
Sbjct: 136 FIGGMAKVEGKFVIVLEVDKVLSIDEMSSLAESA 169



 Score = 63.5 bits (153), Expect = 6e-15
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 7/150 (4%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           QY+ FMLG E+FA+ +  ++EII   +   VP+ P+++ G+ NLRG ++PV+ L      
Sbjct: 19  QYLTFMLGGEMFAIGILGIKEIIEYGSLTVVPMMPAFVRGVINLRGAVVPVVDLSARFGR 78

Query: 79  DRTSATEATRVIVITIG-----KTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133
             ++ T  + VI+I           IG  VD V  V       I+P  + G +I    I 
Sbjct: 79  ANSAITRRSCVIIIEASTEDGQPQDIGLLVDTVSAVQEIPAAQIEPPPSFGARIRADFIG 138

Query: 134 NTIHSDNQIIQVLNCHRLLDNSVEEELELS 163
                + + + VL   ++L  S++E   L+
Sbjct: 139 GMAKVEGKFVIVLEVDKVL--SIDEMSSLA 166



 Score = 53.1 bits (126), Expect = 8e-12
 Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 5/167 (2%)

Query: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246
           DED + L   M+ G+ +A  +   +EI+    + T VP+  + + GVINLRG  +P+V L
Sbjct: 15  DEDAQYLTF-MLGGEMFAIGILGIKEIIEYGSL-TVVPMMPAFVRGVINLRGAVVPVVDL 72

Query: 247 RTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM 306
              FG  + + +    V+++  S  + +   +G++VD V  V  +    ++  P   +++
Sbjct: 73  SARFGRANSAITRRSCVIIIEASTEDGQPQDIGLLVDTVSAVQEIPAAQIEPPPSFGARI 132

Query: 307 GQANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDM 353
            +A+ I  +  ++   + + V+ V+++     +   +E+      D+
Sbjct: 133 -RADFIGGMAKVEG--KFVIVLEVDKVLSIDEMSSLAESAQGPALDL 176