Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., Positive regulator of CheA protein activity (CheW) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 2/161 (1%)

Query: 349 EGTDMSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFI 408
           E T ++  D            + + F+L  EE+GI I  VQEI R  E  +R+     FI
Sbjct: 6   EATHLARHDSARAAAAQAASAEFLTFRLGGEEYGIDILRVQEI-RSYEEPTRIANAPAFI 64

Query: 409 EGVINLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQ 468
           +GV+NLRG ++P+VD+R +    ++  +    ++V+N      G +VDSVS+VL +    
Sbjct: 65  KGVVNLRGVIVPVVDLRIKLGCEKVEYNGFTVVIVLNVHGRVVGAVVDSVSDVLELAGDL 124

Query: 469 LEDAPVLSEE-QAQLMRQMVNLSPRMIGVLSADQLISNTEM 508
           ++ AP ++       +  + ++  RM+ ++  + L+S ++M
Sbjct: 125 IKPAPEMNTNVNTSFITGIASVGERMLILMDIEALMSGSDM 165



 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 23/164 (14%)

Query: 200 GQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISFSD 259
           G+EY   +   QEI R  E  T++    + I GV+NLRG  +P+V LR   G   + ++ 
Sbjct: 35  GEEYGIDILRVQEI-RSYEEPTRIANAPAFIKGVVNLRGVIVPVVDLRIKLGCEKVEYNG 93

Query: 260 SHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAICNLD 319
              V+V+N+         VG VVD+V +V+ L  D++   PE+ + +   + I+ I ++ 
Sbjct: 94  FTVVIVLNV-----HGRVVGAVVDSVSDVLELAGDLIKPAPEMNTNV-NTSFITGIASV- 146

Query: 320 DGRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILE 363
            G R L ++ +E L                G+DM  +D    L+
Sbjct: 147 -GERMLILMDIEAL--------------MSGSDMGLMDSAQALQ 175



 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 35/137 (25%), Positives = 67/137 (48%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           +++ F LG E + + +  V+EI        +   P+++ G+ NLRG I+PV+ LR  L  
Sbjct: 27  EFLTFRLGGEEYGIDILRVQEIRSYEEPTRIANAPAFIKGVVNLRGVIVPVVDLRIKLGC 86

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
           ++      T VIV+ +    +G  VD V +V     ++IKP       ++ + IT     
Sbjct: 87  EKVEYNGFTVVIVLNVHGRVVGAVVDSVSDVLELAGDLIKPAPEMNTNVNTSFITGIASV 146

Query: 139 DNQIIQVLNCHRLLDNS 155
             +++ +++   L+  S
Sbjct: 147 GERMLILMDIEALMSGS 163