Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., purine-binding chemotaxis protein (NCBI) from Escherichia coli BW25113

 Score = 89.4 bits (220), Expect = 9e-23
 Identities = 52/167 (31%), Positives = 99/167 (59%), Gaps = 2/167 (1%)

Query: 353 MSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVI 412
           M+ + +V+ L  + +  + ++F L  EE+GI I  VQEI R  + ++R+  T  FI+GV 
Sbjct: 1   MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVT 59

Query: 413 NLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDA 472
           NLRG ++PIVD+R +F   ++  ++   ++V+N  +   G +VD VS+VL +   Q+  A
Sbjct: 60  NLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPA 119

Query: 473 PVLSEE-QAQLMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDM 518
           P  +     + +  +  L  RM+ +++ ++L+++ EM  L  AA+++
Sbjct: 120 PEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEV 166



 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)

Query: 10  ELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPV 69
           +L  E +  +++ F LGDE + + + +V+EI        +  TP+++ G++NLRG I+P+
Sbjct: 9   KLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPI 68

Query: 70  LCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDP 129
           + LR           + T VIV+ +G+  +G  VD V +V +   E I+P       +  
Sbjct: 69  VDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLST 128

Query: 130 TLITNTIHSDNQIIQVLNCHRLLDNSVEEELEL 162
             +T      ++++ ++N  +LL++   EE+ L
Sbjct: 129 EYLTGLGALGDRMLILVNIEKLLNS---EEMAL 158



 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 17/147 (11%)

Query: 200 GQEY-AFPLEDTQ---EIVRIPEI-----ITKVPLTESAILGVINLRGKTLPLVSLRTLF 250
           GQE+  F L D +   +I+++ EI     +T++  T + I GV NLRG  +P+V LR  F
Sbjct: 16  GQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKF 75

Query: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQAN 310
               + ++D+  V+V+N+      +  VG+VVD V +V+ L  + +   PE    +    
Sbjct: 76  SQVDVDYNDNTVVIVLNLG-----QRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTL-STE 129

Query: 311 DISAICNLDDGRRTLSVISVEQLFDAQ 337
            ++ +  L D  R L ++++E+L +++
Sbjct: 130 YLTGLGALGD--RMLILVNIEKLLNSE 154