Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Chemotaxis signal transduction protein from Enterobacter asburiae PDN3

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 52/165 (31%), Positives = 97/165 (58%), Gaps = 2/165 (1%)

Query: 353 MSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVI 412
           M+ + +V+ L  + +  + ++F L  EE+GI I  VQEI R  + ++R+  T  FI+GV 
Sbjct: 1   MTGMSNVTKLAGEPSGQEFLVFTLGDEEYGIDILKVQEI-RGYDQVTRIANTPAFIKGVT 59

Query: 413 NLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDA 472
           NLRG ++PIVD+R +F   ++   +   ++V+N  +   G +VD VS+VL +   Q+  A
Sbjct: 60  NLRGVIVPIVDLRVKFSQGDVDYDDNTVVIVLNLGQRVVGIVVDGVSDVLSLTSDQIRPA 119

Query: 473 PVLSEE-QAQLMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAAN 516
           P  +     + +  +  L  RM+ +++ ++L+++ EM  L +AA+
Sbjct: 120 PEFAVTLSTEYLTGLGALGERMLILVNIEKLLNSDEMALLDIAAS 164



 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 38/154 (24%), Positives = 79/154 (51%)

Query: 10  ELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPV 69
           +L  E +  +++ F LGDE + + + +V+EI        +  TP+++ G++NLRG I+P+
Sbjct: 9   KLAGEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPI 68

Query: 70  LCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDP 129
           + LR           + T VIV+ +G+  +G  VD V +V +   + I+P       +  
Sbjct: 69  VDLRVKFSQGDVDYDDNTVVIVLNLGQRVVGIVVDGVSDVLSLTSDQIRPAPEFAVTLST 128

Query: 130 TLITNTIHSDNQIIQVLNCHRLLDNSVEEELELS 163
             +T       +++ ++N  +LL++     L+++
Sbjct: 129 EYLTGLGALGERMLILVNIEKLLNSDEMALLDIA 162



 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 21/148 (14%)

Query: 200 GQEY-AFPLEDTQ---EIVRIPEI-----ITKVPLTESAILGVINLRGKTLPLVSLRTLF 250
           GQE+  F L D +   +I+++ EI     +T++  T + I GV NLRG  +P+V LR  F
Sbjct: 16  GQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRVKF 75

Query: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMG--Q 308
               + + D+  V+V+N+      +  VG+VVD V +V+ L  D +   PE    +    
Sbjct: 76  SQGDVDYDDNTVVIVLNLG-----QRVVGIVVDGVSDVLSLTSDQIRPAPEFAVTLSTEY 130

Query: 309 ANDISAICNLDDGRRTLSVISVEQLFDA 336
              + A+     G R L ++++E+L ++
Sbjct: 131 LTGLGAL-----GERMLILVNIEKLLNS 153