Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 165 a.a., chemotaxis protein CheW from Dickeya dianthicola ME23

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 51/157 (32%), Positives = 91/157 (57%), Gaps = 2/157 (1%)

Query: 353 MSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVI 412
           M+ + +V+ L  +    + +IF L  EE+G+ I  VQEI R  + ++R+  T  FI+GV 
Sbjct: 1   MTGLANVTKLAGETVGQEFLIFTLGDEEYGVDILKVQEI-RGYDQVTRIANTPTFIKGVT 59

Query: 413 NLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDA 472
           NLRG ++PIVD+R +F   E+   +   ++V+N  +   G +VD VS+VL +   Q+  A
Sbjct: 60  NLRGVIVPIVDLRIKFMQQEVDYDDNTVVIVLNLGQRVVGIVVDGVSDVLSLTADQIRPA 119

Query: 473 PVLSEE-QAQLMRQMVNLSPRMIGVLSADQLISNTEM 508
           P  +     + +  + +L  RM+ ++  ++L+S+ EM
Sbjct: 120 PEFAVTLSTEYLTGLGSLGERMLILVDIEKLLSSEEM 156



 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           +++ F LGDE + + + +V+EI        +  TP+++ G++NLRG I+P++ LR     
Sbjct: 18  EFLIFTLGDEEYGVDILKVQEIRGYDQVTRIANTPTFIKGVTNLRGVIVPIVDLRIKFMQ 77

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
                 + T VIV+ +G+  +G  VD V +V +   + I+P       +    +T     
Sbjct: 78  QEVDYDDNTVVIVLNLGQRVVGIVVDGVSDVLSLTADQIRPAPEFAVTLSTEYLTGLGSL 137

Query: 139 DNQIIQVLNCHRLLDNSVEEELEL 162
             +++ +++  +LL +   EE+ L
Sbjct: 138 GERMLILVDIEKLLSS---EEMAL 158



 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 17/147 (11%)

Query: 200 GQEYA-FPLEDTQ---EIVRIPEI-----ITKVPLTESAILGVINLRGKTLPLVSLRTLF 250
           GQE+  F L D +   +I+++ EI     +T++  T + I GV NLRG  +P+V LR  F
Sbjct: 16  GQEFLIFTLGDEEYGVDILKVQEIRGYDQVTRIANTPTFIKGVTNLRGVIVPIVDLRIKF 75

Query: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQAN 310
               + + D+  V+V+N+      +  VG+VVD V +V+ L  D +   PE    +    
Sbjct: 76  MQQEVDYDDNTVVIVLNLG-----QRVVGIVVDGVSDVLSLTADQIRPAPEFAVTL-STE 129

Query: 311 DISAICNLDDGRRTLSVISVEQLFDAQ 337
            ++ + +L  G R L ++ +E+L  ++
Sbjct: 130 YLTGLGSL--GERMLILVDIEKLLSSE 154



 Score = 27.3 bits (59), Expect = 4e-04
 Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 8/87 (9%)

Query: 7   VDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTT-------FSVPLTPSYLIGL 59
           +  E+++++N T  +   LG  +  + +  V +++ L          F+V L+  YL GL
Sbjct: 76  MQQEVDYDDN-TVVIVLNLGQRVVGIVVDGVSDVLSLTADQIRPAPEFAVTLSTEYLTGL 134

Query: 60  SNLRGQILPVLCLRTLLCMDRTSATEA 86
            +L  ++L ++ +  LL  +  +  ++
Sbjct: 135 GSLGERMLILVDIEKLLSSEEMALVDS 161