Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 151 a.a., chemotaxis protein CheW from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 44/146 (30%), Positives = 84/146 (57%), Gaps = 2/146 (1%)

Query: 363 EDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIV 422
           E  +   +L+ F++  +EF + I +V+EI R     + +P++  +++GVINLRG VLPI+
Sbjct: 3   EAKDLQRELIAFRIGSQEFCVDIMSVREI-RGWTPATPLPRSPGYMKGVINLRGTVLPII 61

Query: 423 DMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQ 481
           D+  RF L       R  I+V +      G +VD+VS++L++ E+ ++  P V S++   
Sbjct: 62  DLGARFGLTTSEPTARHVIMVAHIGGRMVGLLVDAVSDILQMSEASVQPTPDVASDQVKT 121

Query: 482 LMRQMVNLSPRMIGVLSADQLISNTE 507
            ++ + ++  RMI ++  D ++   E
Sbjct: 122 FVKGIFSIDGRMISLIELDYILPQVE 147



 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 31/134 (23%), Positives = 59/134 (44%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           + + F +G + F + +  V EI        +P +P Y+ G+ NLRG +LP++ L     +
Sbjct: 10  ELIAFRIGSQEFCVDIMSVREIRGWTPATPLPRSPGYMKGVINLRGTVLPIIDLGARFGL 69

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
             +  T    ++V  IG   +G  VD V ++       ++PT         T +      
Sbjct: 70  TTSEPTARHVIMVAHIGGRMVGLLVDAVSDILQMSEASVQPTPDVASDQVKTFVKGIFSI 129

Query: 139 DNQIIQVLNCHRLL 152
           D ++I ++    +L
Sbjct: 130 DGRMISLIELDYIL 143



 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 191 RQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLF 250
           R+L+   +  QE+   +   +EI R     T +P +   + GVINLRG  LP++ L   F
Sbjct: 9   RELIAFRIGSQEFCVDIMSVREI-RGWTPATPLPRSPGYMKGVINLRGTVLPIIDLGARF 67

Query: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQAN 310
           GL +   +  H ++V +I         VG++VDAV +++++    +   P++ S   +  
Sbjct: 68  GLTTSEPTARHVIMVAHIG-----GRMVGLLVDAVSDILQMSEASVQPTPDVASDQVK-T 121

Query: 311 DISAICNLDDGRRTLSVISVEQL 333
            +  I ++D   R +S+I ++ +
Sbjct: 122 FVKGIFSIDG--RMISLIELDYI 142