Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 150 a.a., chemotaxis protein CheW from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 67.4 bits (163), Expect = 3e-16
 Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 2/135 (1%)

Query: 370 QLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFH 429
           +LV F++  + F I I +V EI R     + +P    +++GV+NLRG VLPI+D+  R  
Sbjct: 10  ELVGFRVGDQAFCIDITSVLEI-RGWTATTPLPGAPAYMKGVVNLRGTVLPIIDLAVRLG 68

Query: 430 LPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQ-AQLMRQMVN 488
           LP      R  I+VV   + + G +V+ VS+++++ ++  +D P + E Q A ++  +  
Sbjct: 69  LPTTEPSARNAIVVVRSGERTVGLLVEGVSDIMQLDDAARQDPPNMGEAQGAGVVSGVFA 128

Query: 489 LSPRMIGVLSADQLI 503
           +   +I +L  D L+
Sbjct: 129 VDSALISLLHLDNLL 143



 Score = 59.7 bits (143), Expect = 7e-14
 Identities = 34/134 (25%), Positives = 64/134 (47%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           + V F +GD+ F + +  V EI     T  +P  P+Y+ G+ NLRG +LP++ L   L +
Sbjct: 10  ELVGFRVGDQAFCIDITSVLEIRGWTATTPLPGAPAYMKGVVNLRGTVLPIIDLAVRLGL 69

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHS 138
             T  +    ++V+  G+  +G  V+ V ++   D    +     G      +++     
Sbjct: 70  PTTEPSARNAIVVVRSGERTVGLLVEGVSDIMQLDDAARQDPPNMGEAQGAGVVSGVFAV 129

Query: 139 DNQIIQVLNCHRLL 152
           D+ +I +L+   LL
Sbjct: 130 DSALISLLHLDNLL 143



 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 9/143 (6%)

Query: 191 RQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLF 250
           R+LV   V  Q +   +    EI R     T +P   + + GV+NLRG  LP++ L    
Sbjct: 9   RELVGFRVGDQAFCIDITSVLEI-RGWTATTPLPGAPAYMKGVVNLRGTVLPIIDLAVRL 67

Query: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQAN 310
           GLP+   S  + ++VV       ER  VG++V+ V ++++L  D     P  M +   A 
Sbjct: 68  GLPTTEPSARNAIVVVR----SGER-TVGLLVEGVSDIMQLD-DAARQDPPNMGEAQGAG 121

Query: 311 DISAICNLDDGRRTLSVISVEQL 333
            +S +  +D     +S++ ++ L
Sbjct: 122 VVSGVFAVDSA--LISLLHLDNL 142