Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., Chemotaxis protein CheW from Azospirillum sp. SherDot2

 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 365 DNTDMQLVIFKLDKEEFGISIHTVQEIIR-IPENISRVPKTDDFIEGVINLRGNVLPIVD 423
           + ++ Q V F +  EE+G++I  V+EI    PE  SR+P   D++ GVINLRG ++PI D
Sbjct: 23  NGSEEQYVTFTVGSEEYGVNILAVREIRGWTPE--SRLPNLPDYVRGVINLRGIIIPIFD 80

Query: 424 MRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSE--EQAQ 481
           +R RF        +R  ++V+   + + G +VD++S++L I    ++  P +      A+
Sbjct: 81  LRARFGGGLTQVTKRHVVVVMQVGERTRGILVDAISDILAIGHDAIKPPPDVDSGLVDAE 140

Query: 482 LMRQMVNLSPRMIGVLSADQLIS 504
            +  +     RM+ +L+  +L +
Sbjct: 141 YLSGLYTAENRMVTLLNVGKLFA 163



 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 1/134 (0%)

Query: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78
           QYV F +G E + +++  V EI        +P  P Y+ G+ NLRG I+P+  LR     
Sbjct: 28  QYVTFTVGSEEYGVNILAVREIRGWTPESRLPNLPDYVRGVINLRGIIIPIFDLRARFGG 87

Query: 79  DRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIK-PTNTAGGKIDPTLITNTIH 137
             T  T+   V+V+ +G+   G  VD + ++     + IK P +   G +D   ++    
Sbjct: 88  GLTQVTKRHVVVVMQVGERTRGILVDAISDILAIGHDAIKPPPDVDSGLVDAEYLSGLYT 147

Query: 138 SDNQIIQVLNCHRL 151
           ++N+++ +LN  +L
Sbjct: 148 AENRMVTLLNVGKL 161



 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 10/151 (6%)

Query: 192 QLVCCMVDGQEYAFPLEDTQEIVR-IPEIITKVPLTESAILGVINLRGKTLPLVSLRTLF 250
           Q V   V  +EY   +   +EI    PE  +++P     + GVINLRG  +P+  LR  F
Sbjct: 28  QYVTFTVGSEEYGVNILAVREIRGWTPE--SRLPNLPDYVRGVINLRGIIIPIFDLRARF 85

Query: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQAN 310
           G      +  H V+V+ +   E+ R   G++VDA+ +++ +  D +   P++ S +  A 
Sbjct: 86  GGGLTQVTKRHVVVVMQV--GERTR---GILVDAISDILAIGHDAIKPPPDVDSGLVDAE 140

Query: 311 DISAICNLDDGRRTLSVISVEQLFDAQIVDQ 341
            +S +   ++  R +++++V +LF  + VDQ
Sbjct: 141 YLSGLYTAEN--RMVTLLNVGKLFAGEHVDQ 169