Pairwise Alignments

Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., Chemotaxis protein CheW from Alteromonas macleodii MIT1002

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 52/150 (34%), Positives = 96/150 (64%), Gaps = 3/150 (2%)

Query: 364 DDNTD-MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIV 422
           D N + +Q V ++L +E +GI++  VQE++R  E I+ VP   D++ G+INLRGNV+ ++
Sbjct: 12  DSNDEVLQWVTYRLGEETYGINVMQVQEVLRYTE-IAPVPGAPDYVLGIINLRGNVVTVI 70

Query: 423 DMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQ 481
           D R RF LP     +  RI+++  ++   G +VDSV+EV+ +  S+++ AP V +EE A+
Sbjct: 71  DTRARFGLPPTEITDNTRIVIIESDEQVVGILVDSVAEVVYLKSSEIDSAPNVGTEESAK 130

Query: 482 LMRQMVNLSPRMIGVLSADQLISNTEMYKL 511
            ++ + N    ++ ++  ++L+S+ E  +L
Sbjct: 131 FIQGVSNRDGELLILVDLNKLLSDEEWDEL 160



 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 40/160 (25%), Positives = 82/160 (51%)

Query: 1   MTSEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLS 60
           M+ E + +N  +  + + Q+V + LG+E + +++ +V+E++R      VP  P Y++G+ 
Sbjct: 1   MSDERINNNATDSNDEVLQWVTYRLGEETYGINVMQVQEVLRYTEIAPVPGAPDYVLGII 60

Query: 61  NLRGQILPVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPT 120
           NLRG ++ V+  R    +  T  T+ TR+++I   +  +G  VD V  V       I   
Sbjct: 61  NLRGNVVTVIDTRARFGLPPTEITDNTRIVIIESDEQVVGILVDSVAEVVYLKSSEIDSA 120

Query: 121 NTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEEL 160
              G +     I    + D +++ +++ ++LL +   +EL
Sbjct: 121 PNVGTEESAKFIQGVSNRDGELLILVDLNKLLSDEEWDEL 160



 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 9/159 (5%)

Query: 185 DDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLV 244
           D ++++ Q V   +  + Y   +   QE++R  EI   VP     +LG+INLRG  + ++
Sbjct: 12  DSNDEVLQWVTYRLGEETYGINVMQVQEVLRYTEI-APVPGAPDYVLGIINLRGNVVTVI 70

Query: 245 SLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMS 304
             R  FGLP    +D+ R++++     E +   VG++VD+V EV+ L    +DS P + +
Sbjct: 71  DTRARFGLPPTEITDNTRIVII-----ESDEQVVGILVDSVAEVVYLKSSEIDSAPNVGT 125

Query: 305 KMGQANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFS 343
           +   A  I  + N D     L ++ + +L   +  D+ S
Sbjct: 126 E-ESAKFIQGVSNRDG--ELLILVDLNKLLSDEEWDELS 161