Pairwise Alignments
Query, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056
Subject, 155 a.a., chemotaxis protein from Agrobacterium fabrum C58
Score = 75.5 bits (184), Expect = 1e-18
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 369 MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRF 428
+++V F L +EF I I ++EI R ++ +P T ++ G+INLRG V+P++DM R
Sbjct: 12 LEIVSFHLSDQEFCIDIMAIREI-RGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMAGRL 70
Query: 429 HLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLMRQMV 487
+ ER I+V + G +V+ VS+++ I L+ AP ++ EEQ R +V
Sbjct: 71 GMKMTEPSERSAIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPEEQRSFCRGIV 130
Query: 488 NLSPRMIGVLSADQLISN 505
L M+ L+ D +I++
Sbjct: 131 ALEKSMVCFLNLDTVIAD 148
Score = 63.2 bits (152), Expect = 6e-15
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 7 VDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQI 66
+ N ++ + V+F L D+ F + + + EI +P TP Y++GL NLRG +
Sbjct: 1 MSNAIKQSGAYLEIVSFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAV 60
Query: 67 LPVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGK 126
+PV+ + L M T +E + +IV IG +G V++V ++ T E ++P +
Sbjct: 61 IPVIDMAGRLGMKMTEPSERSAIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPE 120
Query: 127 IDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEEL 160
+ + + ++ LN LD + +EL
Sbjct: 121 EQRSFCRGIVALEKSMVCFLN----LDTVIADEL 150
Score = 41.6 bits (96), Expect = 2e-08
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 204 AFPLEDTQ---EIVRIPEI-----ITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSI 255
+F L D + +I+ I EI +T +P T +LG+INLRG +P++ + G+
Sbjct: 16 SFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMAGRLGMKMT 75
Query: 256 SFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIM 303
S+ ++V +I VG++V+ V +++ + + + P+I+
Sbjct: 76 EPSERSAIIVTDIG-----GKLVGLLVEQVSDMMTIRSEDLQPAPDII 118