Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

 Score =  206 bits (524), Expect = 4e-57
 Identities = 109/332 (32%), Positives = 195/332 (58%), Gaps = 1/332 (0%)

Query: 427 AEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEP 486
           A+ L    +  RM P A V     R++RD+ R LGKQV L IEG+ T+ D+ ++E L  P
Sbjct: 274 AQVLYDTALACRMRPFADVLAGQVRMVRDLGRSLGKQVRLEIEGDKTQVDRDVLEKLEAP 333

Query: 487 LVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTK 546
           L HL+RNA+DHGIE P+ R   GK   G I L A      +++++SDDG GVD+ER++  
Sbjct: 334 LTHLLRNAVDHGIEMPEQRLLAGKPAEGLIRLRASHQAGLLVLELSDDGNGVDLERLRGT 393

Query: 547 ALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLT 606
            ++R L      +R+S++E++  +F PGFS  ++V+++SGRGVG+DAV+  + +  G + 
Sbjct: 394 IVDRHLSPLETAQRLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVV 453

Query: 607 LSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLD 666
           L    G+GS   + +PL++++ R ++ E+ ++++A P+  + +   ++   DI +++   
Sbjct: 454 LEQTAGQGSRFHLEVPLTLSVVRSLVVEVGEEAYAFPLAHIERMCDLA-PDDIVQLEGRQ 512

Query: 667 TFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPL 726
            F   G  V ++   +  +  + Q   D   ++V+R  D V G+AV+R    + +++ PL
Sbjct: 513 HFWHEGRHVGLVAASQLLQRPTGQNPSDTLKVVVIRERDAVYGIAVERFIGERTLVVLPL 572

Query: 727 EGALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
           +  L         A++ DG V+L++D E++++
Sbjct: 573 DDRLGKVQDISAGALLDDGSVVLIVDVEDMLR 604



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 1/138 (0%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           +++ F +E+    +  + GLLALE NP     +    R  H++KGA+ I+  +     ++
Sbjct: 11  LLELFSLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIV-GVDAGVSVS 69

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
           H MED +   ++  + L    +D +L   D  +              EA     + +   
Sbjct: 70  HVMEDCLVSAQESRLYLQPEHIDALLQGTDLLMRIATPGNNVGPADIEAYVALMERLLDP 129

Query: 124 APLTQAAPTHTPTPAVAA 141
           +     AP   P P V A
Sbjct: 130 SQAPVKAPPPEPVPVVEA 147