Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

 Score =  268 bits (686), Expect = 6e-76
 Identities = 149/386 (38%), Positives = 235/386 (60%), Gaps = 8/386 (2%)

Query: 367 KQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRL 426
           K+  +++VD EKVD L++LVGEL++ ++ +   A   +     R L+         + R 
Sbjct: 291 KESSSIRVDVEKVDQLINLVGELVITQSMLTQAATMLDPVAYERFLSG-----LGHLERN 345

Query: 427 AEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEP 486
           A DLQ  VM +RM+P+  VF R+PR+IRD+S KLGKQV L   G++TE DK ++E + +P
Sbjct: 346 ARDLQESVMSIRMMPMDYVFSRFPRVIRDVSAKLGKQVRLDTYGKETELDKGLIERIVDP 405

Query: 487 LVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTK 546
           L HL+RN+LDHGIE+PD+R  +GK+ TG++ LSA     +++I++SDDG G++ ER+  K
Sbjct: 406 LTHLVRNSLDHGIETPDVRLAKGKDATGQLLLSAQHHGGNIVIEVSDDGAGLNRERILAK 465

Query: 547 ALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLT 606
           AL++GL  +   E M  +E+  LIF PGFST EQV+D+SGRGVGMD V+  I+  GG + 
Sbjct: 466 ALQQGLPVS---ETMPDEEVWQLIFAPGFSTAEQVTDISGRGVGMDVVKRNIQEMGGHVE 522

Query: 607 LSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLD 666
           + S  G+G+   ++LPL++ I   M  ++  +++ +P+  VI++L+           +  
Sbjct: 523 IHSRGGQGTTTRIVLPLTLAILNGMSVKVGDEAYILPLSYVIESLQPLPEHLHSITADGH 582

Query: 667 TFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPL 726
              +RGE +P++ L R F++  AQ +P    +++V+  D    L VD L     V++K L
Sbjct: 583 VIRVRGEYLPLIELHRVFDVAGAQTHPTQGILVIVQADDSRFALLVDELLGQHQVVVKNL 642

Query: 727 EGALATFSIYRGAAIMGDGRVLLVLD 752
           E           A I+GDG V  ++D
Sbjct: 643 ETNYRKVPGISAATILGDGSVAFIID 668



 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 14/163 (8%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60
           ++   Q F +E+ +L+    + LL L+    D   +N +FR  H++KG +      A  T
Sbjct: 3   LSQFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTA-LT 61

Query: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAV------- 113
              H +E L+ + R G ++LNG M+D  L   D     +   +  QE + + V       
Sbjct: 62  NTTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGVL 121

Query: 114 ------SISKQMIAQLAPLTQAAPTHTPTPAVAAQEETATLSI 150
                 S  + + A  A    AAP   P PA  A    A  ++
Sbjct: 122 QQLALESGDESLAAHAAATAAAAPVAAPAPAPVAAAAPAEAAV 164