Pairwise Alignments
Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056
Subject, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Score = 171 bits (432), Expect = 5e-46
Identities = 107/345 (31%), Positives = 177/345 (51%), Gaps = 7/345 (2%)
Query: 409 VRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLII 468
++K Q + + SV +R +LQ +++ RMV + R R++R S+ GKQV L I
Sbjct: 1549 LQKTVQATEDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDI 1608
Query: 469 EGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVI 528
G E D+ +++ ++ HL+RN + HGIE R + GK+ +G I + + V
Sbjct: 1609 VGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVS 1668
Query: 529 IKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRG 588
+ DDG G+D +R+ +A GL+ A + +S +E LIF+PGFST QVS+L+GRG
Sbjct: 1669 VSFRDDGAGLDRKRIAERARVLGLIGAD--QELSAEEATELIFKPGFSTAGQVSELAGRG 1726
Query: 589 VGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVI 648
+GMD VR I GG + S PG+G+ ++LPL+ ++ V+M + S +P V
Sbjct: 1727 IGMDVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVE 1786
Query: 649 QTLKIS-RHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQ--PILVVRVGD 705
++S D + N F E VP + + ++ + + ++VVR
Sbjct: 1787 LVQRVSGTDLDAAYLHNSHPF--GSEQVPFYWAGALLQASTRSEHAAAKNNTLVVVRSAA 1844
Query: 706 DVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLV 750
+ L VD + Q+V++K L LA G +++ G V L+
Sbjct: 1845 QRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
Score = 42.7 bits (99), Expect = 2e-07
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 5 MQN-FIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
+QN F+ E+R+++++ + L + PDD + L R HT+KG+S ++ + F A
Sbjct: 666 LQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMV-GLTEFGDAA 724
Query: 64 HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
+E ++ A +L +F W+E + Q S +A S S+ A L
Sbjct: 725 WSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRVANALL 784
Query: 124 A 124
A
Sbjct: 785 A 785
Score = 33.1 bits (74), Expect = 2e-04
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 11 ESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRMEDLM 70
E+ +L+ L +PDD A + R +HT+KG S L + AHRME +
Sbjct: 1266 EAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKG-SARLAGAMRLGERAHRMESEI 1324
Query: 71 QKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLTQAA 130
+ + G ++ +LG D + L + + ++ + AP Q
Sbjct: 1325 ELL--GSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPAAQLV 1382
Query: 131 PTHTPTPAVAAQEETA 146
P V A +E+A
Sbjct: 1383 QV-APEAGVPANDESA 1397