Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  333 bits (853), Expect = 2e-95
 Identities = 226/760 (29%), Positives = 394/760 (51%), Gaps = 60/760 (7%)

Query: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60
           M  + + F +E R+ +E+    LL L+ +  D  ++N +FR  H++KG +G   N+   +
Sbjct: 5   MEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTF-NLHEIS 63

Query: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMI 120
           +  H +E  +  +R+    L    +D +L  CD     ++  EQ   +     ++ +Q+ 
Sbjct: 64  EFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDE---ALKQQVG 120

Query: 121 AQLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDALLLIYT 180
           A+L  L           A     +   +S +  T  +  D     +A  +      + + 
Sbjct: 121 AELQALL------ADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQ---GWRIRFV 171

Query: 181 PDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQQL 240
           P +  F+SG+DPL  +R + ++                YQ ++    L + A  +++ +L
Sbjct: 172 PHETLFYSGNDPLRILRELRELG-------------SEYQIELDHQALPELA--EIDPEL 216

Query: 241 APIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTFLSIKNL 300
             +    RL    S+N     + +   +VE      IA +  ++ S  V        ++ 
Sbjct: 217 CYLSWTIRLTGDVSEN----DVRELFDWVEDECDLHIAPILSDEASAHV--------EDE 264

Query: 301 YCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQ 360
             A +  +   P    E V+  +L  +   +           +   N+PA+  +      
Sbjct: 265 QAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAPVIANPKESATNKPAKTDS------ 318

Query: 361 LDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQ 420
                   + +++VD EKVD L++LVGEL++ ++ +  L     N+F + KL   +KA  
Sbjct: 319 -------SVSSIRVDIEKVDNLINLVGELVITQSMLTELG----NDFSMDKL-DKLKAGL 366

Query: 421 SVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIV 480
           + + + ++DLQ  V+ +RM+P++  F R+PRL+RD+  +LGK+VDL I+GE TE DK+++
Sbjct: 367 AQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVL 426

Query: 481 EDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDV 540
           E + +PLVHL+RN +DHG+E PD+R  +GK  TG ITL AF    S+I+++SDDG G+D 
Sbjct: 427 ERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDC 486

Query: 541 ERVKTKALERGLVE-ASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIE 599
           +++  KA+E+G++E  ++   ++ ++II+LIF PGFST EQVSD+SGRGVGMD VR  IE
Sbjct: 487 DKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIE 546

Query: 600 RNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDI 659
             GG + + SE G+GS  T+ LPL++ I    + ++  Q + IP+ +++++++I+     
Sbjct: 547 ELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVK 606

Query: 660 RRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQ 719
                ++ + LR E +PIL L+    M  +    + + I  V      +GL VD L + Q
Sbjct: 607 HAAGGIELYRLREENIPILRLQDELAMGRSGSL-EKRLICFVESAGHRVGLLVDDLLDQQ 665

Query: 720 DVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKH 759
            V+IK LE   A  +   GA I+GDG V L+LD   ++ H
Sbjct: 666 QVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIAH 705