Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  316 bits (810), Expect = 3e-90
 Identities = 229/798 (28%), Positives = 416/798 (52%), Gaps = 72/798 (9%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           I+Q+F++E+ +++E  +  L+ LE NP+D+ ++N +FR  HTVKG +G L  ++   +  
Sbjct: 9   ILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLA-LSELVETC 67

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
           H  E++   +R+G   ++ +++D ML   D        +++ + L         +++ +L
Sbjct: 68  HGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPA----DPELLDEL 123

Query: 124 APLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDV-EALLEHPDALLLIYTPD 182
             L++        PA   ++E A     E  E L  +   +V E ++E  +A+  + T  
Sbjct: 124 HRLSK--------PASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVE--EAVPNVETEV 173

Query: 183 KQCFFSGDDPLAWMRSVEKVSWRKVV-------LIPDSE-PFDTYQAQMQFLLLTQS--- 231
                SG      +  + +  + K++         P ++ P     A  +   +T S   
Sbjct: 174 TASASSGVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLN 233

Query: 232 ---AKKDLEQQLAPIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIA--------LL 280
                 + E+ L  + G+ +   I++   P AP+   T       K   A        L+
Sbjct: 234 GDITDDEFEKLLDQLHGKGKGPSIETA-APAAPVTPSTPKATETPKPAAAKSAPGGDDLM 292

Query: 281 REEQ----VSESVRAGTFLSIKNLYCALSQQISDRPAPLPESVSADELITLFDNILLSFA 336
            +E+    + E   +G   S++ L  A ++ ++  P       SA+             A
Sbjct: 293 TDEEFEKLLDELHGSGKGPSVEELEMA-TRPVASSPVSSDAKASAEASAPSTKPAAKPVA 351

Query: 337 HRTAIIDK-CENEPAQ---PSAITVNEQLDKV------KKKQIK-TLKVDQEKVDLLMDL 385
              A      + EPA+   P+A+  +++  +V      KK Q + T++VD   +D +M++
Sbjct: 352 KPAAAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNM 411

Query: 386 VGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATV 445
           VGEL++ +N +  L   + +E   + +A         +  +  DLQ  VM+ RM P+  V
Sbjct: 412 VGELVLVRNRLLSLGLNSNDEEMSKAVAN--------LDVVTADLQGAVMKTRMQPIKKV 463

Query: 446 FQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIR 505
           F R+PR++RD++R L K++DL + GE+T+ DK++VE L++PL+HL+RN++DHGIE PD R
Sbjct: 464 FGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDER 523

Query: 506 REQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQE 565
            + GK+ TGK+ LSA    D + + + DDG G+D ++++  A++RG+++     R++ +E
Sbjct: 524 AKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKE 583

Query: 566 IIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSM 625
             +LIF PGFS+ E+++D+SGRGVGMD V+TAI    G++ + S  GKG++IT+ +PL++
Sbjct: 584 CFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTL 643

Query: 626 TISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLD---TFILRGETVPILYLKR 682
            I   +M  +    FA+P+ SV +      H D+RR   +D   T I+R +++P+ YL+ 
Sbjct: 644 AILPTLMVGVAGHPFALPLASVNEIF----HLDLRRTNVVDGQLTIIVREKSIPLFYLQN 699

Query: 683 --AFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAA 740
             A +    Q+      +++V++G   +GL VD L   ++V+IKPL+  L       GA 
Sbjct: 700 WLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGAT 759

Query: 741 IMGDGRVLLVLDTEEVVK 758
           I  DG + L+LD  +++K
Sbjct: 760 ITSDGHIALILDVPDLLK 777