Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

 Score =  283 bits (723), Expect = 3e-80
 Identities = 150/391 (38%), Positives = 243/391 (62%), Gaps = 15/391 (3%)

Query: 371 TLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAEDL 430
           T++VD  ++D +M++VGEL++ +N +  L   + +E   + ++         +  +  DL
Sbjct: 362 TVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSN--------LDVVTADL 413

Query: 431 QSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLVHL 490
           Q+ VM+ RM P+  VF R+PRL+RD++R+L K+++L + GE+T+ DK++VE L++PLVHL
Sbjct: 414 QTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHL 473

Query: 491 IRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALER 550
           +RNA+DHGIE PD R   GK  TG++ LSA    D +++ +SDDGKG+D   ++ KA+E+
Sbjct: 474 VRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVEK 533

Query: 551 GLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSE 610
           GL++    ER+S+ +  +LIF PGFST  ++SD+SGRGVGMD V+T I +  G++ + S 
Sbjct: 534 GLMDKDAAERLSESDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFSA 593

Query: 611 PGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLD---T 667
            G+GS+I + +PL++ I   +M  L  Q+FA P+ +V +      H D+ R   +D    
Sbjct: 594 KGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIF----HLDLSRTNVVDGQEV 649

Query: 668 FILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPLE 727
            I+R + +P+ YLKR               ++++ VG   +G  VD+L   ++V+IKPL 
Sbjct: 650 VIVRDKALPLFYLKRWLVQGQVHEEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLG 709

Query: 728 GALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
             L       GA I GDGR+ L+LD   ++K
Sbjct: 710 KMLQGTPGMSGATITGDGRIALILDVPSMLK 740



 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 20/189 (10%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           I+Q+F++E+ +++E  +  L+ LE+ PDD  ++N +FR  HTVKG +G L  +    +  
Sbjct: 9   ILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFL-QLNELVECC 67

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123
           H  E++   +R G   ++  ++D++L   D       ++ +     AE    +  ++A L
Sbjct: 68  HIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRER----AEVTPATPALLAAL 123

Query: 124 APLTQ-------AAPTHTP-TPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDAL 175
           + L +       AAP   P    VAA    A     ++T+       ++ E LL+  DA+
Sbjct: 124 SRLAEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITD-------SEFEQLLDSLDAI 176

Query: 176 LLIYTPDKQ 184
                 D+Q
Sbjct: 177 KAQAAADEQ 185