Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 6e-57
 Identities = 112/356 (31%), Positives = 206/356 (57%), Gaps = 1/356 (0%)

Query: 403 AENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGK 462
           AE +  +++ A D+       S+ A+ L    +  RM P A V     R++RD+ R LGK
Sbjct: 258 AETQRILQQQAADLDEFGWQASQRAQLLYDTALACRMRPFADVLTGQSRMVRDLGRSLGK 317

Query: 463 QVDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFT 522
            V L++EGE T+ D+ ++E L  PL HL+RNA+DHGIE P+ R   GK   G I L A  
Sbjct: 318 PVRLVVEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIELPERRLLAGKPDEGVIRLRASH 377

Query: 523 LDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVS 582
               + +++ DDG G+D+ER+++  +ER L  A  + RMS+ E++  +F PGFS  ++V+
Sbjct: 378 QAGMLSLELIDDGAGIDLERLRSSIVERALSPADTVARMSEAELLTFLFLPGFSLRDKVT 437

Query: 583 DLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAI 642
           ++SGRGVG+DAV+  I    G++ L+   G+G    + +PL++++ R ++ E+  +++A 
Sbjct: 438 EVSGRGVGLDAVQHLIRELRGSIELTQVAGQGCRFHLQVPLTLSVVRSLVVEVGGEAYAF 497

Query: 643 PIESVIQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVR 702
           P+  + +TL+++  + I +++    F   G  + ++   +     + Q       ++V+R
Sbjct: 498 PLAHIERTLEVTA-EQIVQIEGRQHFWHEGRHIGLVAASQLLNRPAGQSDEASLRVVVIR 556

Query: 703 VGDDVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
             + + G+AV+RL   + +++ PL+  L         A++ DG V+L++D E++++
Sbjct: 557 EREQLYGVAVERLVGERVLVVMPLDPRLGKVQDISSGALLDDGSVVLIVDVEDLLR 612



 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 7/138 (5%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           +++ F +E+    +    GL+ALE NP     +    R  H++KGA+ I+  +     +A
Sbjct: 11  LLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIV-GVDAGVSVA 69

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAV--SISKQMIA 121
           H MED +   ++G + L    +D +L   D  +     +    +  A+A       QM +
Sbjct: 70  HVMEDCLVAAQEGRLRLTAEHIDALLQGTDLLM----RIATPGDAGAQATLPVFLAQMAS 125

Query: 122 QLAPLTQAAPTHTPTPAV 139
            L P   A P   P  +V
Sbjct: 126 LLDPGASAMPVVPPAASV 143