Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 710 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  266 bits (679), Expect = 4e-75
 Identities = 146/391 (37%), Positives = 234/391 (59%), Gaps = 8/391 (2%)

Query: 371 TLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAEDL 430
           TL+V   KVD L++LVGEL++ +  +   +   ++     K  Q + A  + + R   DL
Sbjct: 327 TLRVSVSKVDQLINLVGELVITQAMLAQKSRELDD-----KDNQPLLAGLADLDRNTRDL 381

Query: 431 QSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLVHL 490
           Q  VM +RM+P++ VF R+PR++RD++ KLGK+V+L+ +GE TE DK +VE +++PL HL
Sbjct: 382 QEAVMSIRMIPMSVVFNRFPRMLRDLATKLGKKVELVTQGESTELDKGLVEKITDPLTHL 441

Query: 491 IRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALER 550
           IRN+ DHGIE P+ RR +GK+  G ITLSA     S++I++ DDGKG+  E++  KA E+
Sbjct: 442 IRNSCDHGIEMPEERRAKGKSENGTITLSATHEGGSILIEVRDDGKGLSREKLLRKAREK 501

Query: 551 GLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSE 610
           G+      + ++  E+ +LIF PGFST E+V+D+SGRGVGMD V+  I    GT+ + S 
Sbjct: 502 GI---DAPDSLTDSEVWNLIFAPGFSTAEEVTDVSGRGVGMDVVKKNIAALNGTVEIDSA 558

Query: 611 PGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLDTFIL 670
            G G  +++ LPL++ I   M   +  + + +P+ +VI++ +I         +      +
Sbjct: 559 EGFGMRVSVRLPLTLAIMDGMSVRVSDEVYILPLSNVIESFQIKPTDIDTMAQGARVVKV 618

Query: 671 RGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPLEGAL 730
           R E +P++ L++ F++   +       ++VV      + L VD L   Q V+IK LE   
Sbjct: 619 RDEYMPVVELEQVFQVPRFEFNGSSPIMVVVEAEGSRVALMVDELLGQQQVVIKNLESNY 678

Query: 731 ATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR 761
                  GA I+GDG+V L+LDT  +V+ +R
Sbjct: 679 RKVPNVSGATILGDGKVALILDTSGLVRRSR 709



 Score = 49.3 bits (116), Expect = 7e-10
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 22/164 (13%)

Query: 8   FIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRME 67
           F  E+ + ++   + LLAL+    D   +N +FR  H++KG +      A   +L H+ME
Sbjct: 24  FFEEAGENLDQMEQMLLALDLEKADDEELNAIFRCAHSIKGGAATF-GFADVAELTHQME 82

Query: 68  DLMQKVRDGHVALNGTMLDLMLGCCD--------------------QFLLWIEELEQHQE 107
            L+ K+R   +     M+D++L   D                      +  I  L   ++
Sbjct: 83  SLLDKLRRHELTPTAAMVDVLLESSDALRGLLGAHQGRGGEPPATAALVARISVLAHGED 142

Query: 108 LSA-EAVSISKQMIAQLAPLTQAAPTHTPTPAVAAQEETATLSI 150
             A EA + +  ++A  AP+   AP   P PA  A +    L I
Sbjct: 143 AEAEEAPAPAPVIVAAPAPVAAPAPVAAPAPARKAAKVERELEI 186