Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  221 bits (564), Expect = 8e-62
 Identities = 136/414 (32%), Positives = 228/414 (55%), Gaps = 20/414 (4%)

Query: 363 KVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSV 422
           +V+ K   T++V   K+D L+ L+GE++   +S   L  R  +   + +  QD + E + 
Sbjct: 155 EVRLKSADTVRVQLTKLDELIRLMGEVV---SSHARLRQRLTDIRQIERETQD-RGEAAA 210

Query: 423 ISRLAEDLQSVVMQ--------------VRMVPLATVFQRYPRLIRDISRKLGKQVDLII 468
           ++  A DL+  V                +RM+PLA V +   RLIRD+ R LGK V+ ++
Sbjct: 211 LTGFARDLREDVFSQELLMDELHAKALVMRMLPLAIVLEPAARLIRDLGRSLGKDVECVV 270

Query: 469 EGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVI 528
            G + E D+ +++ L++P+VHL+RN++DHGIE    R+  GK P G I LSA      V+
Sbjct: 271 GGTEIELDRQLIDRLNDPIVHLLRNSVDHGIEDAATRQAAGKPPFGTIRLSARQDGGWVL 330

Query: 529 IKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRG 588
           I+++DDG G+ +  ++ KA+ +GL+ A +   M   E I LIF PGFST   ++++SGRG
Sbjct: 331 IEVADDGGGLPLAAIRDKAVRKGLLSAEQAAAMPDSEAIDLIFSPGFSTSSIITEVSGRG 390

Query: 589 VGMDAV-RTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESV 647
           VGMD V RT ++   G + + + PGKG+   + LPLS+ + RV++     +SF    + V
Sbjct: 391 VGMDVVKRTIVDDLQGVIGVETVPGKGTTFALRLPLSLAVMRVLVVSAGGESFGFTAQYV 450

Query: 648 IQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDV 707
            Q L++   + +  V   D  ++  E +P++ L     +  A+    +  ++VVRV ++ 
Sbjct: 451 AQLLELPPER-LLTVAERDAVVIDNEFIPVVSLATLLGLPGARPARPVLRLVVVRVRNEK 509

Query: 708 LGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR 761
           L L VD L + +D++IKPL   L    +  G  + G   ++ VL    ++  AR
Sbjct: 510 LALLVDELIDERDMVIKPLPEHLRHLPLVAGMVMTGRNTLVSVLHAPVLLDMAR 563



 Score = 65.5 bits (158), Expect = 9e-15
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 16/165 (9%)

Query: 8   FIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRME 67
           F+ E+RD +     GL  L++ P D   IN +FR  HTVKG+S +L  + P T+ AH++E
Sbjct: 12  FVDEARDHLRKVEDGLATLDSTPADSETINAVFRSAHTVKGSSRML-KLIPITETAHKVE 70

Query: 68  DLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL---A 124
           D++  +RDG ++ +  +  L+    D     ++ +      +    ++   + A L    
Sbjct: 71  DVLGALRDGSLSWSPELRRLLQRGVDALSAQVDAVADGNPPAEPDPALCAALAAALRGPQ 130

Query: 125 PLTQAAPTHTPTPAVAAQE------------ETATLSISELTELL 157
           P T+  P   P  A  A E            +T  + +++L EL+
Sbjct: 131 PATEPPPAPAPASAPPAAEPPPQAEVRLKSADTVRVQLTKLDELI 175