Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 2142 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  124 bits (310), Expect = 7e-32
 Identities = 73/246 (29%), Positives = 129/246 (52%), Gaps = 8/246 (3%)

Query: 382  LMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQV---R 438
            L +++G+  + +   + +   AE    + +LA D+   +++ + + E ++ +++++   R
Sbjct: 1893 LREIIGDDFLDRG--ERITLTAEQVVQLERLASDLLRGEAIDTAVPE-IRRLLVEIGFLR 1949

Query: 439  MVPLATVFQRYPRLIRDISRKLGKQVDL--IIEGEDTEADKSIVEDLSEPLVHLIRNALD 496
              PL      +   +  ++ +L K V    I  GED   D          L H+ RNA+ 
Sbjct: 1950 KTPLCDTLSGHRNTVAQVAARLEKNVAPVEISGGEDIWIDPKTFAPFLRSLAHVFRNAVT 2009

Query: 497  HGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALERGLVEAS 556
            HGIE PD R   GKN +G+IT       DS+ + ++DDG G+D   V+T+ +E GL+ A 
Sbjct: 2010 HGIEDPDSRLLAGKNESGRITCKVGRTADSIHLSIADDGVGIDQGAVRTRVVEAGLMPAE 2069

Query: 557  KLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSE 616
             +  M++ +++ LIF    +T   +   SGRGVG+ AVR    + GGT+ + + PG+G+E
Sbjct: 2070 AVAAMTEAQVLDLIFLDSMTTNVHLDQFSGRGVGLAAVRAETAKLGGTVAVRTRPGQGTE 2129

Query: 617  ITMILP 622
                LP
Sbjct: 2130 FVFTLP 2135