Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 772 a.a., Chemotaxis protein CheA from Azospirillum sp. SherDot2

 Score =  282 bits (722), Expect = 4e-80
 Identities = 219/774 (28%), Positives = 366/774 (47%), Gaps = 84/774 (10%)

Query: 6   QNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHR 65
           Q +  ES +L+  A  GLL L     D   +N +FR +H++KG  G           AH 
Sbjct: 9   QTYFDESAELLAVAEAGLLRLAPGEIDMDEVNAIFRAVHSIKGGGGAF-GFNDLVAFAHE 67

Query: 66  MEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSA----EAVSISKQMIA 121
            E +M  VR+  + ++  ++D ++   D     +       E+ A    + V+  ++ + 
Sbjct: 68  FETVMDGVRNAEIPVSTELVDTLIRANDVLARLLAHAADETEVPAGTTVDTVAALRRFLG 127

Query: 122 QLAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEH-------PDA 174
           +       AP     PA A Q         E  E      F D  A ++        PDA
Sbjct: 128 KAGEPADEAPAE---PAAAIQAAAGFYPDDEDDEA---GIFGDALAAIQAARDDRPAPDA 181

Query: 175 ---------LLLIYTPDKQCFFSGDDPLAWMRSVEKVSWRKVVLIPDSEPFDTYQAQMQF 225
                      +++ P  +   SG++P   +R++ ++   +VV   D  P          
Sbjct: 182 GPVPEGKVRWTIVFRPKAELLLSGNEPTYMLRALRRLGEAEVVCHLDRLP---------- 231

Query: 226 LLLTQSAKKDLEQQLAPIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQV 285
                 + +DL+ +L  +     L  +    +  A ID   ++V      +I        
Sbjct: 232 ------SLRDLDAELLHLSWTVTL--LADPQVDRAQIDDVFEFVADDCDIRI-------- 275

Query: 286 SESVRAGTFLSIKNLYCALSQQISDRPAPLPESVS---ADELITLFDNILLSFAHRTAII 342
             S  A     I       ++ ++   A LPE V+   A  ++T       S A +    
Sbjct: 276 --SAEAPPPALIAPALVPSAEPVTAPAANLPEPVAPAAAPAILTATPAATTSGAAKPGDG 333

Query: 343 DKCENEPAQPSAITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSM-QYLAY 401
            K  N  +  +  T +            T++VD +K+D L+++VGE+++ +  + ++L  
Sbjct: 334 AKRTNGGSDHAGPTTH------------TIRVDLDKIDRLVNMVGEMVITQAMIAEHLRD 381

Query: 402 RAENEFGVRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLG 461
               +F      Q++      +++   +L+  VM +R  P+++VF R PRL+R+ +   G
Sbjct: 382 LPPGQF------QELLEGLEGLAQHTRELRESVMSIRAQPVSSVFSRMPRLVRECAAVTG 435

Query: 462 KQVDLIIEGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAF 521
           K+V L+  GE TE DK++VE+L +PL H+IRN++DHG+E P+ R   GK   G + LSA 
Sbjct: 436 KEVMLVTTGETTEVDKTVVENLVDPLTHMIRNSIDHGLEGPEERERVGKPRAGTVHLSAA 495

Query: 522 TLDDSVIIKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQV 581
                ++I+++DDG+G++  +V +KA+E+GLV+      +S +EI HLIF PGFST +QV
Sbjct: 496 HRSGRIVIEVTDDGRGINRAKVLSKAIEKGLVQPG--ASLSDEEIDHLIFLPGFSTADQV 553

Query: 582 SDLSGRGVGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFA 641
           S+LSGRGVGMD VR  I   GG + + S PG+GS   + LPL++ +   M+  + ++ F 
Sbjct: 554 SNLSGRGVGMDVVRRNISSLGGRIGVYSTPGEGSRFVLSLPLTLAVLDGMVISVGEERFV 613

Query: 642 IPIESVIQTLKISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVV 701
           +P+ +++++L+         V   D  + RGE V +++L R F +  A    D    LVV
Sbjct: 614 LPLTNIVESLRPKPADLHGLVNKCDVMMARGEYVRLVHLHRLFGIPKA--IDDATKGLVV 671

Query: 702 RVGDD---VLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLD 752
            V  +    LGL VD +   Q V+IK LE           A I+GDGRV L+LD
Sbjct: 672 LVETEDGSRLGLVVDEVLGQQQVVIKSLESNFRRLDGVAAATILGDGRVALILD 725