Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., Gliding motility regulatory protein from Alteromonas macleodii MIT1002

 Score =  125 bits (314), Expect = 7e-33
 Identities = 94/346 (27%), Positives = 165/346 (47%), Gaps = 15/346 (4%)

Query: 412 LAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGE 471
           L +  K   S +    + L+ VV++ R+ P++   +     +R   R     V+    G 
Sbjct: 209 LKEQTKKISSELQNRLKTLEKVVLKSRLKPISDACEPVQAFLRSEERT----VNFEARGV 264

Query: 472 DTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKM 531
               D+ IVE L+  L+HL RN+++HG E    R  QGK P  KI +       ++ +  
Sbjct: 265 HHSTDRYIVERLTTVLMHLARNSIEHGFEDTQERVRQGKAPHCKIEIEVRKEGRNIRLLY 324

Query: 532 SDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGM 591
           +DDGKG+D +R++   +  G V       ++    ++++F+PG ST E+VS +SGRGVG+
Sbjct: 325 ADDGKGIDRDRLRKAIVGLGDVS------LNDDINLNVLFQPGVSTSEKVSKVSGRGVGL 378

Query: 592 DAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTL 651
            AV+ AI    G++ + S PG G +  +++P  +    V++  +   + AI    +  T 
Sbjct: 379 YAVQCAISEMRGSIAVESTPGNGIQFDLVIPQDLANFDVLIATVADTNIAIDPNHIEYTC 438

Query: 652 KISRHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLA 711
            +      + V N     + G+T PI+ L   F +  A +    +  +V++       L 
Sbjct: 439 SLPSSYKYKNVHN-HLIEIEGKTYPIIELPPIF-IGKATL---AKAAIVLKHNSHKYVLI 493

Query: 712 VDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVV 757
           VD+L   + VI++ L   +       GAAI     + L++D   VV
Sbjct: 494 VDQLIGLESVIVRTLFEQIGESPGLSGAAIRDGRDIALLIDVAHVV 539



 Score = 29.6 bits (65), Expect = 6e-04
 Identities = 15/71 (21%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 4  IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
          +++ F +E  + ++  +  +  ++ N  D+  +N LFR  H++KGA+  + N +    + 
Sbjct: 10 LIETFHLEMDEHLQVMSEVIPGMKFNSRDEDKLNLLFRAAHSLKGAARSVGN-SQVEDIC 68

Query: 64 HRMEDLMQKVR 74
          H  E  + +++
Sbjct: 69 HVFESFLSELK 79