Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., Chemotaxis protein CheA from Alteromonas macleodii MIT1002

 Score =  275 bits (703), Expect = 6e-78
 Identities = 145/391 (37%), Positives = 241/391 (61%), Gaps = 15/391 (3%)

Query: 371 TLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAEDL 430
           T++VD +++D +M++VGEL++ +N +  L   + +E   + +A         +  +  DL
Sbjct: 358 TVRVDTKRLDQIMNMVGELVLVRNRLISLGINSNDESMSKAIAN--------LDVVTGDL 409

Query: 431 QSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLVHL 490
           Q  VM+ RM P+  VF R+PR++RD++R L K++ L + GE+T+ DK++VE L++PLVHL
Sbjct: 410 QGAVMKTRMQPIKKVFGRFPRVVRDLARSLKKEITLELVGEETDLDKNLVEALADPLVHL 469

Query: 491 IRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALER 550
           +RN++DHGIE PD R   GK   G + LSA    D +++ + DDGKG+D E++K  A+ R
Sbjct: 470 VRNSVDHGIEMPDDRAAAGKPRMGTVQLSASQEGDHILLTIEDDGKGMDPEKLKEIAISR 529

Query: 551 GLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSSE 610
           G+++A    RMS  E  +LIF PGFST  ++SD+SGRGVGMD V+T I +  GT+ + S+
Sbjct: 530 GVLDADAAARMSDVEAFNLIFAPGFSTKTEISDISGRGVGMDVVKTKINQLNGTVNIDSQ 589

Query: 611 PGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLD---T 667
            GKG+ + + +PL++ I   +M  + +Q+FA+P+ +V + + +    DI++   +D   T
Sbjct: 590 LGKGTRLDIKVPLTLAILPTLMIVVGKQTFALPLGAVNEIINM----DIKKTNTVDGQLT 645

Query: 668 FILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQEGQDVIIKPLE 727
            I+R + +P+ +L          I  +   ++VV++G   +G  VD L   ++V+IKPL+
Sbjct: 646 MIVRSKAIPLFFLGEWLIRGPKNIDREKGHVVVVQIGTQQVGFVVDALIGQEEVVIKPLD 705

Query: 728 GALATFSIYRGAAIMGDGRVLLVLDTEEVVK 758
             L       GA I  DG + L+LD   ++K
Sbjct: 706 ALLQGTPGMAGATITSDGGIALILDIPSLLK 736



 Score = 70.5 bits (171), Expect = 3e-16
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 28/187 (14%)

Query: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63
           I+Q+F++E+ +++E     L+ LE NP+D  ++N +FR  HTVKG +G L ++    ++ 
Sbjct: 9   ILQDFLVEAGEILEQLQEQLVDLENNPEDADLLNAIFRGYHTVKGGAGFL-SLTELVEIC 67

Query: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQEL---SAEAVSISKQMI 120
           H  E++   +R+G   L   ++D++L   D  +   E ++    L    A  V +  ++ 
Sbjct: 68  HGAENVFDVMRNGQRTLTPELMDIILQATDVVVEMFERVKARDPLEPADAHLVDLLHKLS 127

Query: 121 AQLAP-----LTQAAPTHTPTPAV-----AAQEETATL-------SISELTELLGRDCFN 163
              +P       Q+AP   P PA+       +E TA          I E+TE       +
Sbjct: 128 RPESPDENIFGEQSAPVSEPEPAIEEPELVVEEPTAQAPSSGDSGGIDEITE-------D 180

Query: 164 DVEALLE 170
           + EALL+
Sbjct: 181 EFEALLD 187