Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

 Score =  281 bits (720), Expect = 7e-80
 Identities = 216/761 (28%), Positives = 366/761 (48%), Gaps = 62/761 (8%)

Query: 22  GLLALEANPDDKAIINELFREIHTVKGASGI--LDNIAPFTQLAHRMEDLMQKVRDGHVA 79
           GLL L     D   +N +FR +H++KG +G   LD++  F   AH  E  +  VR   + 
Sbjct: 4   GLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAF---AHVFETTLDCVRSNKLE 60

Query: 80  LNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLT--QAAPTHTPTP 137
               +L +ML   D   +  +     ++  +   S ++ ++ +L  L   +A P   P P
Sbjct: 61  PTQDVLKVMLRSAD---VLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAPAP 117

Query: 138 -AVAAQEETATLSISELTELLG--------RDCFNDVEALLEHPDALLLIYTPDKQCFFS 188
            AV A E     +  + T+  G         D  ++   L+E P    + + P    +  
Sbjct: 118 VAVKAPEPVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVP-TFQITFKPHASLYSK 176

Query: 189 GDDPLAWMRSVEKVSWRKVVL-IPDSEPFDTYQAQMQFLLLTQSAKKDLEQQLAPIEGQY 247
           G++    +R + ++    V   + D    D    +  +L  T S   +  ++   I   +
Sbjct: 177 GNEAALLLRDLSRIGDMSVNCDMSDLPALDKLDPEASYLSWTVSIATEKGEE--GIRSVF 234

Query: 248 RLYRIQSDNLPTAPIDQRTQYVERI----VKQQIALLREEQVSESVRAGTFLSIKNLYCA 303
                  D   TA +   +   E +    V   ++ L  +   E   A    ++++ Y A
Sbjct: 235 EFAEWDCDLEITAVVSDASADEEELPMIPVPFDLSALDGDAQDEPAVATP--AMEDAYVA 292

Query: 304 LSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQLDK 363
            + + +     + +SV+A                    I+K E   A P+A   N     
Sbjct: 293 ATVEAAVATTQIAQSVNA-------------------AIEKRE-AAAAPAAAQANANA-A 331

Query: 364 VKKKQIKTLKVDQEKVDLLMDLVGELIV--AKNSMQYLAYRAENEFGVRKLAQDIKAEQS 421
                 +T++VD ++VD L++LVGEL++  A  S   +   A     V     +++    
Sbjct: 332 ANASAGQTIRVDLDRVDRLINLVGELVINQAMLSQSVIENDASGTSAVNMGLDELQ---- 387

Query: 422 VISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVE 481
              +L  ++Q  VM +R  P+  VFQR  R++R+++  +GKQ+ L+ EGE+TE DK++++
Sbjct: 388 ---QLTREIQDSVMAIRAQPVKPVFQRMSRIVREVADMIGKQIRLVTEGENTEVDKTVID 444

Query: 482 DLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVE 541
            L+EPL H+IRNA+DHGIE+P+ R   GKNP G I LSA      ++I++ DDG G++ E
Sbjct: 445 KLAEPLTHMIRNAVDHGIETPEKREAAGKNPEGTIKLSAKHRSGRILIELQDDGAGINRE 504

Query: 542 RVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERN 601
           RV+ KA++  L+ A     ++ +EI +LIF PGFST +++SD+SGRGVGMD V+ +I+  
Sbjct: 505 RVRQKAIDNDLIAAD--ANLTDEEIDNLIFAPGFSTADKISDISGRGVGMDVVKRSIQAL 562

Query: 602 GGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRR 661
           GG +++SS PG GS  TM LPL++ +   M+  +  Q+  +P+ ++++TL+         
Sbjct: 563 GGRISISSRPGLGSTFTMSLPLTLAVLDGMVVTVAGQTLVVPLTAIVETLQPEAKNIHSF 622

Query: 662 VKNLDTFILRGETVPILYLKRAFEMNSAQIYP-DIQPILVVRVGDDVLGLAVDRLQEGQD 720
             N     +R    P++ + R       Q  P +   +LV   G     L VD +Q  + 
Sbjct: 623 GSNQRLISIRNSFCPLVDVGRVLNFRPTQADPVEGVALLVESEGGGQRALMVDAIQGQRQ 682

Query: 721 VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR 761
           V+IK LE           A I+GDGRV L+LD + +V  +R
Sbjct: 683 VVIKSLEANYTHVPGIAAATILGDGRVALILDVDAIVSASR 723