Pairwise Alignments

Query, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 1460 a.a., Sensor histidine kinase RcsC from Acinetobacter radioresistens SK82

 Score =  213 bits (543), Expect = 5e-59
 Identities = 205/833 (24%), Positives = 381/833 (45%), Gaps = 113/833 (13%)

Query: 8    FIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRME 67
            F+ E+ +L+      L +          +N L R +HT+KG + ++        +AH +E
Sbjct: 519  FLEEAEELLAGMDSDLNSWTKESGQVTALNNLMRYLHTLKGGANMVQ-ATHMGLIAHELE 577

Query: 68   DLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLT 127
             + Q++ +G V ++  ++ ++    D+    I+ L + Q       +I  +++  +  ++
Sbjct: 578  SIYQRIINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATI--EILKNIESIS 635

Query: 128  QAAPTHTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDALLL---IYTPDKQ 184
                  T  P VA ++ + +   S+  E    DC      + EH + L     + +  ++
Sbjct: 636  TGVLVTTAEPKVAEEKLSES---SQNIESDIADCTLADAEIAEHSEELQTDEQVRSIVEE 692

Query: 185  CFFSGDDPLAWMRS------VEKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSAKKDLEQ 238
             F    + L           VE+ S R ++L          Q Q     L   A+    +
Sbjct: 693  VFLEEAEELLQTAHNLLDQWVEERSNRSLLL----------QLQRNAHSLKGGARMAELE 742

Query: 239  QLAPI----EGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGTF 294
             +A I    E  +  + +   NL T+  D       R ++   A+ +E+  +       F
Sbjct: 743  PVAVIAYALENTFEQFGLH--NLTTSVYDPLLHTALRWLEN--AIFKEQYEN-------F 791

Query: 295  LSIKNLYCALSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAII--------DKCE 346
             S+K+   ++  Q ++ PA L   + AD ++   D+ L  F H             D  E
Sbjct: 792  DSLKHSLDSI--QFTEIPAQLINQIPADNIVA--DSSLFEFVHGDGTEPPSMMGEWDNTE 847

Query: 347  ----NEPAQPSAITVNEQLDKVKKKQIKTLKVD-----------------QEKVDLLMDL 385
                NE  + SA  V + +D   +  I   +V+                 Q   D L  +
Sbjct: 848  RTENNEMIRISADLVEKMIDLAGENSINRSRVEMDVGQVGSILSDMELAIQRLADQLRRM 907

Query: 386  VGEL---IVAKNSMQYLAYR--------------------AENEFGV----RKLAQDIKA 418
             GEL   I+AK+  +   Y                     AE+   +      L++ I+ 
Sbjct: 908  EGELESQIIAKHGTENSRYSDFDPLEMDQYSSLNQLSKSLAESASDLLDFKTTLSEKIRD 967

Query: 419  EQSVI---SRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEA 475
             + ++   SR+  ++Q  +M+ R+VP + +  R  R+ R  S  L +  +L+++  + E 
Sbjct: 968  TEGLLLQQSRIQAEIQENLMRTRLVPFSRLLPRLQRIARQTSSALNRPAELVVQNTEGEL 1027

Query: 476  DKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDG 535
            D++I+E L  PL H++RNA+DHGIE+ + R +QGK  +G+I L+       VII  +DDG
Sbjct: 1028 DRNILERLVTPLEHMLRNAIDHGIETIEQRLKQGKPESGRIELNINRQGTDVIITFTDDG 1087

Query: 536  KGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVR 595
            +G+++E++K KALERGL+ A   +++  +E+  LIF PG ST  +++ +SGRGVG+D V+
Sbjct: 1088 QGINLEKLKNKALERGLIGAE--QKLEAEELAQLIFHPGLSTAVEITQISGRGVGLDVVQ 1145

Query: 596  TAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISR 655
            ++I+  GG +T+ S  G+G+  T+ +P ++ IS  +M +   Q +A+P+  + + ++IS 
Sbjct: 1146 SSIKAMGGHVTVESVQGQGTTFTIRVPTTVAISDALMVKAGDQQYAVPLAQIERIVRISP 1205

Query: 656  H--KDIRRVKNLDTFILRGETVPILYLKRAFEMNS----AQIYPDIQPILVVRVGDDVLG 709
               +D    K  DTF +      + YL       S      I   +  +L+       + 
Sbjct: 1206 SMLEDYFAGKE-DTFRIDNMYYKLRYLSEFVANQSLPRLTGIVHSLPVLLIKGSSGQTVA 1264

Query: 710  LAVDRLQEGQ-DVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR 761
            L VD+L   +  +++KP+   LA+     GA I+GDG+V L+LD + + +  +
Sbjct: 1265 LLVDQLVGSRAQIVVKPVGQQLASVGAVAGATILGDGQVCLILDGQYIARQVQ 1317