Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  106 bits (265), Expect = 2e-27
 Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 28/284 (9%)

Query: 64  GNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQ-KATEDIL 122
           GN F RF+++IH          VS+  + ++E   L  + A +   VNSD Q   T  + 
Sbjct: 337 GNAFNRFVERIHTSI-----REVSSATEHVNEVA-LRVVSASNSSMVNSDEQANRTNSVA 390

Query: 123 NHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQVN 182
             I  L  AA             + +     ++   V+     +   L S I      + 
Sbjct: 391 AAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMISASSSNIE 450

Query: 183 DVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRAGE 242
            + ++ + + +I EVI+ I+ +TNLLALNAAIEAAR+GE GRGFAVVADEVR+LA R  E
Sbjct: 451 ALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQE 510

Query: 243 AASQISEEIESLRA--------------EVTQRFEVANKESSEQNI------KADMMIES 282
           +A Q+ + IE L+                  +  ++AN      N       + D M +S
Sbjct: 511 SAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGEIDGMNQS 570

Query: 283 VQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSM-ACTQFQ 325
           V +  +  +SV E     IT+I   N +  +N+  ++ AC   +
Sbjct: 571 VATATEEQTSVVESINMDITEINTLNQEGVENLQSTLRACADLE 614