Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 32/252 (12%)

Query: 71  LQQIHEQE-------TMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATEDILN 123
           LQ+I E E        ++ K+  +++  W +++  +   +   I N +SD Q A  D   
Sbjct: 329 LQEIAEGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASSDLQSAAADTRE 388

Query: 124 HICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQVND 183
              +++ AA      ++ +      MV++ +E     S  A S      ++   ++ + +
Sbjct: 389 VAHNMNQAAGRQREAVELVSTAFNEMVATANEVARSCSAAATSADEGYRDVHDGQQHIGE 448

Query: 184 VLNRVMGLNE---------------------ITEVISKIANETNLLALNAAIEAARSGEM 222
               V+ L+E                     I + I  IA +TNLLALNAAIEAAR+G+ 
Sbjct: 449 ATGSVLKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQ 508

Query: 223 GRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMMIES 282
           GRGFAVVADEVR LA+R  ++      EI+SL   + +R +   ++     + +   +E 
Sbjct: 509 GRGFAVVADEVRALARRTADSTG----EIDSLLGNLARRTQEVTQQMQGSLLVSHTSVER 564

Query: 283 VQSLRQSFSSVR 294
           +Q  R SF  +R
Sbjct: 565 IQQARDSFDKIR 576