Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score = 95.1 bits (235), Expect = 6e-24
 Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 23/194 (11%)

Query: 167 TRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGF 226
           T+S+   +      V  + +R++ ++ IT +IS+I N+TNLLALNAAIEAAR+GE GRGF
Sbjct: 528 TQSIRDVVARSSSSVQRLDSRMVEIDNITGLISEITNQTNLLALNAAIEAARAGEHGRGF 587

Query: 227 AVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRF--------EVAN-----KESSEQN 273
           AVVADEVR LA R   AA  I   +ESL+ E  Q          +V N     +++S +N
Sbjct: 588 AVVADEVRSLAARTSRAADDIRHMVESLQGETRQAVSFMEQGVQDVDNSLRLAEDASSEN 647

Query: 274 IKADMMIESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSMACTQFQDIVRQKLD 333
           ++    +ES+      F+ +++L+ R +     Y   +E+    S    Q   +++    
Sbjct: 648 VQLHQAVESM------FAIIQQLNRRSVE----YGKTIEQVNQSSSEMRQTALVLQSSAQ 697

Query: 334 SIEALMREKHLLVG 347
            ++    +   LVG
Sbjct: 698 KVKVDAGKLQKLVG 711



 Score = 25.4 bits (54), Expect = 0.006
 Identities = 23/136 (16%), Positives = 57/136 (41%)

Query: 102 LVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVIS 161
           +VAD + ++ +   +A +DI + + SL         +++    D  N +   ++ +    
Sbjct: 589 VVADEVRSLAARTSRAADDIRHMVESLQGETRQAVSFMEQGVQDVDNSLRLAEDASSENV 648

Query: 162 NLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGE 221
            L  +  S+ + IQ   ++  +    +  +N+ +  + + A      A    ++A +  +
Sbjct: 649 QLHQAVESMFAIIQQLNRRSVEYGKTIEQVNQSSSEMRQTALVLQSSAQKVKVDAGKLQK 708

Query: 222 MGRGFAVVADEVRHLA 237
           +   F V  D  R +A
Sbjct: 709 LVGQFEVSDDGERGVA 724