Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis sensor receptor protein from Pseudomonas sp. S08-1

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 3/132 (2%)

Query: 174 IQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEV 233
           +Q   + VN++ N    +  + +VI+ IA +TNLLALNAAIEAAR+GE GRGFAVVADEV
Sbjct: 334 VQEIGQAVNELANSTQSIGSVADVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 393

Query: 234 RHLAQRAGEAASQISEEIESLRAEVTQRFEVANK--ESSEQNIKA-DMMIESVQSLRQSF 290
           R LA R  E+  QI + I SLR    +    AN+  E S  ++++ + + E++  + Q+ 
Sbjct: 394 RALAGRTRESTEQIHQIISSLRNGADKAVNTANRGEEISRDSVRSVEAVREALDGISQAV 453

Query: 291 SSVRELSERQIT 302
           + +  +S++  T
Sbjct: 454 TRITGMSQQMAT 465



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 102 LVADHIENVNSDAQKATEDILNHICSLDHA---AANFTHYLKDMEFDSQNMVSSLDEHTL 158
           +VAD +  +    +++TE I   I SL +    A N  +  +++  DS   V ++ E   
Sbjct: 388 VVADEVRALAGRTRESTEQIHQIISSLRNGADKAVNTANRGEEISRDSVRSVEAVREALD 447

Query: 159 VISNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAAR 218
            IS        +   + T  +Q + V        +I+  I++IA     L+ ++A +A +
Sbjct: 448 GISQAVTRITGMSQQMATASEQQSHV------AEDISRQITRIAQ----LSDHSAGQAQQ 497

Query: 219 SGEMGRGFAVVADEVRHLAQR 239
           S  + +    +A  +  LA+R
Sbjct: 498 SVGISQELEQMAAYLHSLAER 518