Pairwise Alignments

Query, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein McpG from Pseudomonas sp. RS175

 Score =  100 bits (250), Expect = 9e-26
 Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 42/291 (14%)

Query: 64  GNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKA-TEDIL 122
           G  F RF+++IH          VS+  + ++E   L  + A +   VNSD Q + T  + 
Sbjct: 337 GTAFNRFVERIHGSI-----REVSSATEHVNEVA-LRVVSASNSSMVNSDEQSSRTNSVA 390

Query: 123 NHICSLDHAA-------ANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQ 175
             I  L  AA       A  +H   D    +++    ++     ++ L+D   +  +N++
Sbjct: 391 AAINQLGAAAQEIARNAAQASHQASDARGLAEDGQQVVERSIAAMNRLSDLLSASSTNVE 450

Query: 176 TERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRH 235
           T       + ++ + + +I EVI+ I+ +TNLLALNAAIEAAR+GE GRGFAVVADEVR+
Sbjct: 451 T-------LNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRN 503

Query: 236 LAQRAGEAASQISEEIESL----RAEVT----------QRFEVANKESSEQNI------K 275
           LA R  E+A Q+   IE L    R  VT          +  E+AN      N       +
Sbjct: 504 LAHRTQESAQQVQTMIEELQVGARDSVTTMNDSQRHSQESVEIANLAGERLNSVTQRIGE 563

Query: 276 ADMMIESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSM-ACTQFQ 325
            D M +SV +  +  ++V E     I +I   N +  +N+  ++ AC+  +
Sbjct: 564 IDGMNQSVATATEEQTAVVESINVDINEINTLNQEGVENLQATLRACSDLE 614