Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Variovorax sp. SCN45

 Score =  124 bits (312), Expect = 6e-33
 Identities = 113/468 (24%), Positives = 202/468 (43%), Gaps = 28/468 (5%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQAINRD 65
           L+W +RDLR+ D+A L  AL + R  + +++F+  +L      +R   F+ +SL  +  +
Sbjct: 16  LMWFRRDLRVDDNAALYRALRACRQVVCVFVFDKAILDPLPTVDRRVEFIRESLLELEAE 75

Query: 66  LAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQHDIVW 125
           L    G +++           +A    ++A++++++       +RD  +        + +
Sbjct: 76  LRALGGALIVRHGLAAQEIPALAHDLDVQAVFANRD-DEPDALERDAKVFGALANAGVTF 134

Query: 126 HEFPYAAVIRGAQTRKN----------WDEHWQQVMRSPCCDPDLTRANWLKLDAATLGL 175
           H +  + V    +              +   W   + S        R++   L       
Sbjct: 135 HTYKDSTVFDRDEVMTKTGQPYTVFTPYKRAWLAKVDSFFLKSYPVRSHADALVPPPEAY 194

Query: 176 RSDIPATWQS--KQAGMQT----GGSDMAWATLEDFFARRGREYYRSISSPSLARHACSR 229
           R  +P+  +   +++ + T     G+  A    EDFF R  R Y  + + P++     S 
Sbjct: 195 REPMPSLGELGFEKSNLSTLEIPTGTRGAGTLFEDFFERIDR-YDEARNFPAV--RGPSY 251

Query: 230 MSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFES----ECEME 285
           M  +L +G +S+R+M  +L    S+ G   +   LS  L W   + Q            E
Sbjct: 252 MGVHLRFGTVSIRQM-ASLAHQLSLQGNAGAATWLSE-LIWRDFYFQILAHFPYVHTGGE 309

Query: 286 FRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSV 345
            +     YD +             AW  G TG PLVDA M  + Q+GY++ R+R ++ S 
Sbjct: 310 SKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHNRLRMVVASF 369

Query: 346 LTHHMNVDWRAGVTYLAQLFLDFEPGIHYP--QFQMQAGVTGTNTIRIYNPTKQAQEHDS 403
           L   + +DWR G  Y A    DFE   +    Q+   +G       RI+NP  Q++  D 
Sbjct: 370 LCKDLGLDWRRGEAYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVTQSERFDP 429

Query: 404 EGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMD 451
           EG+FI +++P+LA +    +  PW  +P+E +   + L   Y KPV+D
Sbjct: 430 EGKFIRRYLPQLAGLSNAAIHAPWQASPVELEAAGIKLGETYPKPVVD 477