Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (367), Expect = 2e-39
 Identities = 122/462 (26%), Positives = 192/462 (41%), Gaps = 36/462 (7%)

Query: 4   INLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQAIN 63
           + LVW +RDLR  D+  L AAL SG P   +Y+  P      H +      +W+ L  + 
Sbjct: 1   MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ 60

Query: 64  RDLAQSKGEVLIV-TSDWQTC---FARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQ 119
           ++LA     +     +D+Q      +++A+      + ++++  L    QRD    Q   
Sbjct: 61  QELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELD-EQQRDQLAQQLLS 119

Query: 120 QHDIVWHEFPYAAVIRGAQTRKNWDEH----------WQQVMRSPCCDPDLTRANWLKLD 169
           +  I+W  F    V+     R    E           W  + + P    +   A W  + 
Sbjct: 120 EQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALW-NVP 178

Query: 170 AATLGLRSDIPATWQSKQAGMQTGGSDMAWAT--------LEDFFARRGREYYRSISSPS 221
           +A   L       W  +QA          WA         L DF   R ++Y+++   P 
Sbjct: 179 SALAEL------VWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFP- 231

Query: 222 LARHACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESE 281
            AR   S +SPYLA G +S R+    L    S+           S L W   +      E
Sbjct: 232 -AREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIE 290

Query: 282 CEMEFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAM 341
             +        + + L+  +D    QL  W  G TG P+VDA MR L QTG+++ R+R +
Sbjct: 291 PNLSKSRDFVEWGARLEWWNDNEKFQL--WCEGKTGYPIVDAAMRQLNQTGWMHNRLRMI 348

Query: 342 LVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQA--GVTGTNTIRIYNPTKQAQ 399
           + S LT  +++DWR G  Y     +D +   +   +Q  A  G  G    RI+NP  Q +
Sbjct: 349 VASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGE 408

Query: 400 EHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPL 441
           + D  G FI +WVPEL  V    + +PW    + + +Y   L
Sbjct: 409 KFDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPARL 450