Pairwise Alignments

Query, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., deoxyribodipyrimidine photo-lyase from Paraburkholderia sabiae LMG 24235

 Score =  124 bits (310), Expect = 1e-32
 Identities = 123/486 (25%), Positives = 204/486 (41%), Gaps = 41/486 (8%)

Query: 6   LVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLL---------GDAH---YSERHWR 53
           LVW +RDLR  D+A L  AL        +++F+  +L          DAH     +R   
Sbjct: 15  LVWFRRDLRTGDNAALYYALKHCERVWCVFVFDTTILQPLIDSAHQHDAHSGKVQDRRIE 74

Query: 54  FVWQSLQAINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLA 113
           F+  S++ ++  L +  G ++++  D      ++A +  +EA++++ +       +RD  
Sbjct: 75  FILASVEELDGSLKEGGGGLIVLHGDPVDAIPKLAAQLEVEAVFTNHDYE-PVAIERDET 133

Query: 114 LAQWCQQHDIVWHEFPYAAVIRGAQ----------TRKNWDEHWQQVMRSPCCDP----- 158
           +A   +        F    +    +            + +   W + +      P     
Sbjct: 134 IADHLRDDGRQLLTFKDQVIFERDELLNGQRKPFAVFRPYKNAWLKQLTPFDLKPYPVER 193

Query: 159 ---DLTRANWLKLDAATLGLRSDIPATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYR 215
               L R    KLD A   L     A  +  +  +  G S  A   LEDF  R    Y  
Sbjct: 194 YAQSLARPPH-KLDHAWPTLAKMGFAPGEMAETKLLAGMSG-ARTLLEDFTTRID-SYAN 250

Query: 216 SISSPSLARHACSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFI 275
               P  A    S +S +L +G +S+R + + L    S+    +      S L W   + 
Sbjct: 251 RRDFP--AARGTSHLSVHLRFGTVSIRTLAR-LAHEMSLQPDGQGAATWLSELIWRDFYF 307

Query: 276 QKFESECEMEFR-CVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYL 334
                   +  R    R +D+L  ++     A  AAW  G TG PLVDA M  L QTG++
Sbjct: 308 MILTHHPHIAKRESFKREFDTLRWETGKDADALFAAWCDGRTGYPLVDAAMLQLNQTGFM 367

Query: 335 NFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQA--GVTGTNTIRIY 392
           + R+R +  S L   + +DWR G  Y  +   DF+   +   +Q  A  G       RI+
Sbjct: 368 HNRLRMVTASFLAKDLGIDWRRGERYFEEKLNDFDFSANNGGWQWAASTGCDAQPWFRIF 427

Query: 393 NPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDL 452
           NP  Q+++ D +G FI +++PEL +VP   +  PW   P + + + V L   Y +PV+D 
Sbjct: 428 NPVTQSEKFDPQGLFIKRFLPELEKVPAKWIHAPWQADPDDLKDWGVVLGKDYPQPVVD- 486

Query: 453 EASAKQ 458
            A A+Q
Sbjct: 487 HAKARQ 492